RNA–Protein interactions for RNA: ENSMUST00000102800.7

Gapvd1-202, Transcript of GTPase-activating protein and VPS9 domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gapvd1, Length 8,339 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gapvd1-202ENSMUST00000102800 Pelp1Q9DBD5 1123 aaKnown RBP23.13■■□□□ 1.29
Gapvd1-202ENSMUST00000102800 Cngb1E1AZ71 1325 aa23.1■■□□□ 1.29
Gapvd1-202ENSMUST00000102800 Rhox8Q6VSS7 320 aa22.91■■□□□ 1.26
Gapvd1-202ENSMUST00000102800 Rpgrip1Q9EPQ2 1331 aa22.82■■□□□ 1.24
Gapvd1-202ENSMUST00000102800 Las1lA2BE28 776 aaKnown RBP22.54■■□□□ 1.2
Gapvd1-202ENSMUST00000102800 Amer1Q7TS75 1132 aa22.39■■□□□ 1.18
Gapvd1-202ENSMUST00000102800 4930567H17RikQ3V0K5 233 aa22.23■■□□□ 1.15
Gapvd1-202ENSMUST00000102800 Wdr66E9Q743 1299 aa22.03■■□□□ 1.12
Gapvd1-202ENSMUST00000102800 Ube2uB1AUC4 352 aa21.48■■□□□ 1.03
Gapvd1-202ENSMUST00000102800 CenpbP27790 599 aa21.08■□□□□ 0.97
Gapvd1-202ENSMUST00000102800 Ehmt2Q9Z148 1263 aaKnown RBP20.97■□□□□ 0.95
Gapvd1-202ENSMUST00000102800 Ttbk1Q6PCN3 1308 aa20.89■□□□□ 0.93
Gapvd1-202ENSMUST00000102800 Stra8P70278 393 aa20.85■□□□□ 0.93
Gapvd1-202ENSMUST00000102800 Zeb1Q64318 1117 aa20.85■□□□□ 0.93
Gapvd1-202ENSMUST00000102800 4933416C03RikQ3V063 378 aa20.82■□□□□ 0.92
Gapvd1-202ENSMUST00000102800 Myt1Q8CFC2 1127 aa20.44■□□□□ 0.86
Gapvd1-202ENSMUST00000102800 Slc24a1Q91WD8 1130 aa20.41■□□□□ 0.86
Gapvd1-202ENSMUST00000102800 Esf1Q3V1V3 845 aaKnown RBP20.39■□□□□ 0.85
Gapvd1-202ENSMUST00000102800 NeflP08551 543 aa20.33■□□□□ 0.84
Gapvd1-202ENSMUST00000102800 Npm2Q80W85 207 aa20.26■□□□□ 0.83
Gapvd1-202ENSMUST00000102800 Anp32bQ9EST5 272 aaKnown RBP20.12■□□□□ 0.81
Gapvd1-202ENSMUST00000102800 CatipB9EKE5 520 aa20.01■□□□□ 0.79
Gapvd1-202ENSMUST00000102800 NrdcQ8BHG1 1161 aa19.94■□□□□ 0.78
Gapvd1-202ENSMUST00000102800 Myt1lP97500 1187 aa19.93■□□□□ 0.78
Gapvd1-202ENSMUST00000102800 Rtl5Q5DTT4 599 aa19.89■□□□□ 0.78
Gapvd1-202ENSMUST00000102800 Ythdc1E9Q5K9 736 aaKnown RBP19.88■□□□□ 0.77
Gapvd1-202ENSMUST00000102800 Gab3Q8BSM5 595 aa19.83■□□□□ 0.77
Gapvd1-202ENSMUST00000102800 Tnnt3Q9QZ47 272 aa19.82■□□□□ 0.76
Gapvd1-202ENSMUST00000102800 NefmP08553 848 aa19.81■□□□□ 0.76
Gapvd1-202ENSMUST00000102800 Cdk11bP24788 784 aaKnown RBP19.77■□□□□ 0.76
Gapvd1-202ENSMUST00000102800 Ccdc136Q3TVA9 1136 aa19.69■□□□□ 0.74
Gapvd1-202ENSMUST00000102800 HrcG5E8J6 738 aa19.68■□□□□ 0.74
Gapvd1-202ENSMUST00000102800 Os9Q8K2C7 672 aa19.67■□□□□ 0.74
Gapvd1-202ENSMUST00000102800 Eif5bQ05D44 1216 aaKnown RBP19.65■□□□□ 0.74
Gapvd1-202ENSMUST00000102800 DaxxO35613 739 aa19.55■□□□□ 0.72
Gapvd1-202ENSMUST00000102800 UbtfP25976 765 aaKnown RBP19.5■□□□□ 0.71
Gapvd1-202ENSMUST00000102800 DiexfQ8BTT6 772 aaKnown RBP19.47■□□□□ 0.71
Gapvd1-202ENSMUST00000102800 Trim41Q5NCC3 630 aa19.44■□□□□ 0.7
Gapvd1-202ENSMUST00000102800 Lmod3E9QA62 571 aa19.34■□□□□ 0.69
Gapvd1-202ENSMUST00000102800 Upf2A2AT37 1269 aaKnown RBP19.34■□□□□ 0.69
Gapvd1-202ENSMUST00000102800 Neurod1Q60867 357 aa19.32■□□□□ 0.68
Gapvd1-202ENSMUST00000102800 Hsp90aa1P07901 733 aaKnown RBP19.31■□□□□ 0.68
Gapvd1-202ENSMUST00000102800 NclP09405 707 aaKnown RBP19.31■□□□□ 0.68
Gapvd1-202ENSMUST00000102800 Nop58Q6DFW4 536 aaKnown RBP19.21■□□□□ 0.67
Gapvd1-202ENSMUST00000102800 Acin1Q9JIX8 1338 aaKnown RBP19.18■□□□□ 0.66
Gapvd1-202ENSMUST00000102800 Fam50aQ9WV03 339 aaKnown RBP19.04■□□□□ 0.64
Gapvd1-202ENSMUST00000102800 Rtl1Q7M732 1744 aa18.93■□□□□ 0.62
Gapvd1-202ENSMUST00000102800 Anp32aO35381 247 aa18.92■□□□□ 0.62
Gapvd1-202ENSMUST00000102800 ArxO35085 564 aa18.92■□□□□ 0.62
Gapvd1-202ENSMUST00000102800 Gm13697A2AK42 830 aa18.9■□□□□ 0.62
Gapvd1-202ENSMUST00000102800 Chic1Q8CBW7 227 aa18.9■□□□□ 0.62
Gapvd1-202ENSMUST00000102800 Nlrp6Q91WS2 869 aa18.87■□□□□ 0.61
Gapvd1-202ENSMUST00000102800 Polr3glQ8R0C0 218 aa18.87■□□□□ 0.61
Gapvd1-202ENSMUST00000102800 Znf326O88291 580 aa18.87■□□□□ 0.61
Gapvd1-202ENSMUST00000102800 Trim44Q9QXA7 346 aa18.8■□□□□ 0.6
Gapvd1-202ENSMUST00000102800 Ccdc180J3QNE4 1664 aa18.73■□□□□ 0.59
Gapvd1-202ENSMUST00000102800 DekQ7TNV0 380 aaKnown RBP18.71■□□□□ 0.59
Gapvd1-202ENSMUST00000102800 Atp1b4Q99ME6 356 aa18.67■□□□□ 0.58
Gapvd1-202ENSMUST00000102800 TonslQ6NZL6 1363 aa18.65■□□□□ 0.58
Gapvd1-202ENSMUST00000102800 Pcgf6Q99NA9 353 aa18.65■□□□□ 0.58
Gapvd1-202ENSMUST00000102800 Slc4a1apE9PX68 744 aa18.63■□□□□ 0.57
Gapvd1-202ENSMUST00000102800 BccipQ9CWI3 316 aa18.62■□□□□ 0.57
Gapvd1-202ENSMUST00000102800 Gm13695A2AK44 830 aa18.59■□□□□ 0.57
Gapvd1-202ENSMUST00000102800 Ccdc9Q8VC31 543 aaKnown RBP18.59■□□□□ 0.57
Gapvd1-202ENSMUST00000102800 Il27Q8K3I6 234 aa18.58■□□□□ 0.56
Gapvd1-202ENSMUST00000102800 Adam1bQ8R534 806 aa18.57■□□□□ 0.56
Gapvd1-202ENSMUST00000102800 Ap3b1Q9Z1T1 1105 aa18.56■□□□□ 0.56
Gapvd1-202ENSMUST00000102800 Hnrnpul2Q00PI9 745 aaKnown RBP18.54■□□□□ 0.56
Gapvd1-202ENSMUST00000102800 Ppargc1bQ8VHJ7 1014 aa18.53■□□□□ 0.56
Gapvd1-202ENSMUST00000102800 Hdac5Q9Z2V6 1113 aa18.52■□□□□ 0.56
Gapvd1-202ENSMUST00000102800 Vsig10D3YX43 558 aa18.5■□□□□ 0.55
Gapvd1-202ENSMUST00000102800 Zbtb7cQ8VCZ7 619 aa18.49■□□□□ 0.55
Gapvd1-202ENSMUST00000102800 PnnO35691 725 aaKnown RBP18.48■□□□□ 0.55
Gapvd1-202ENSMUST00000102800 Znf316Q6PGE4 1016 aa18.47■□□□□ 0.55
Gapvd1-202ENSMUST00000102800 PtmaP26350 111 aa18.43■□□□□ 0.54
Gapvd1-202ENSMUST00000102800 Mak16Q8BGS0 296 aaKnown RBP18.43■□□□□ 0.54
Gapvd1-202ENSMUST00000102800 Prm3Q62100 101 aa18.41■□□□□ 0.54
Gapvd1-202ENSMUST00000102800 Tnnt2P50752 301 aa18.38■□□□□ 0.53
Gapvd1-202ENSMUST00000102800 Prdm10Q3UTQ7 1184 aa18.38■□□□□ 0.53
Gapvd1-202ENSMUST00000102800 SetQ9EQU5 289 aaKnown RBP18.37■□□□□ 0.53
Gapvd1-202ENSMUST00000102800 Erich6D3Z6S9 713 aa18.37■□□□□ 0.53
Gapvd1-202ENSMUST00000102800 Noc3lQ8VI84 807 aaKnown RBP18.36■□□□□ 0.53
Gapvd1-202ENSMUST00000102800 Fgd1P52734 960 aa18.33■□□□□ 0.53
Gapvd1-202ENSMUST00000102800 Rangap1P46061 589 aaKnown RBP18.33■□□□□ 0.52
Gapvd1-202ENSMUST00000102800 Zbtb4Q5F293 982 aa18.3■□□□□ 0.52
Gapvd1-202ENSMUST00000102800 Calcoco2A2A6M5 331 aa18.29■□□□□ 0.52
Gapvd1-202ENSMUST00000102800 Csrnp3P59055 597 aa18.23■□□□□ 0.51
Gapvd1-202ENSMUST00000102800 Supt5hO55201 1082 aaKnown RBP18.16■□□□□ 0.5
Gapvd1-202ENSMUST00000102800 Ppp4r2Q0VGB7 417 aa18.14■□□□□ 0.49
Gapvd1-202ENSMUST00000102800 ClspnQ80YR7 1315 aa18.12■□□□□ 0.49
Gapvd1-202ENSMUST00000102800 Hsp90ab1P11499 724 aaKnown RBP18.1■□□□□ 0.49
Gapvd1-202ENSMUST00000102800 Htatsf1Q8BGC0 757 aa18.1■□□□□ 0.49
Gapvd1-202ENSMUST00000102800 Clstn1Q9EPL2 979 aa18.09■□□□□ 0.49
Gapvd1-202ENSMUST00000102800 Podxl2Q8CAE9 603 aa18.07■□□□□ 0.48
Gapvd1-202ENSMUST00000102800 Calr4Q3TQS0 420 aa18.06■□□□□ 0.48
Gapvd1-202ENSMUST00000102800 Casc1Q6TDU8 730 aa18.06■□□□□ 0.48
Gapvd1-202ENSMUST00000102800 Gm973E9Q295 1059 aa18.04■□□□□ 0.48
Gapvd1-202ENSMUST00000102800 Ftsj3Q9DBE9 838 aaKnown RBP18.04■□□□□ 0.48
Gapvd1-202ENSMUST00000102800 Plcb2A3KGF7 1181 aa18.01■□□□□ 0.47
Gapvd1-202ENSMUST00000102800 Pes1Q9EQ61 584 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms