RNA–Protein interactions for RNA: ENSMUST00000078734.11

Pabpc4-201, Transcript of Polyadenylate-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Pabpc4, Length 2,700 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc4-201ENSMUST00000078734 Gm35339A0A140LHH9 1649 aa22.32■■□□□ 1.16
Pabpc4-201ENSMUST00000078734 NischQ80TM9 1593 aa22.03■■□□□ 1.12
Pabpc4-201ENSMUST00000078734 Abcc8B2RUS7 1588 aa21.34■■□□□ 1.01
Pabpc4-201ENSMUST00000078734 Abcc9P70170 1546 aa21.29■■□□□ 1
Pabpc4-201ENSMUST00000078734 ScribQ80U72 1612 aa20.78■□□□□ 0.92
Pabpc4-201ENSMUST00000078734 Kdm5dQ62240 1548 aa20■□□□□ 0.79
Pabpc4-201ENSMUST00000078734 NacadQ5SWP3 1504 aa19.91■□□□□ 0.78
Pabpc4-201ENSMUST00000078734 Sycp2Q9CUU3 1500 aa19.58■□□□□ 0.72
Pabpc4-201ENSMUST00000078734 Dcaf1Q80TR8 1506 aa19.5■□□□□ 0.71
Pabpc4-201ENSMUST00000078734 BicraF8VPZ9 1578 aa19.44■□□□□ 0.7
Pabpc4-201ENSMUST00000078734 Dnajc5bQ9CQ94 199 aa19.28■□□□□ 0.68
Pabpc4-201ENSMUST00000078734 Rb1cc1Q9ESK9 1588 aa19.22■□□□□ 0.67
Pabpc4-201ENSMUST00000078734 Rhox8Q6VSS7 320 aa18.99■□□□□ 0.63
Pabpc4-201ENSMUST00000078734 Baz1aO88379 1555 aa18.87■□□□□ 0.61
Pabpc4-201ENSMUST00000078734 Thoc2B1AZI6 1594 aaKnown RBP18.75■□□□□ 0.59
Pabpc4-201ENSMUST00000078734 Zcchc6Q5BLK4 1491 aaKnown RBP18.73■□□□□ 0.59
Pabpc4-201ENSMUST00000078734 Pds5bQ4VA53 1446 aaKnown RBP18.73■□□□□ 0.59
Pabpc4-201ENSMUST00000078734 Ccdc180J3QNE4 1664 aa18.68■□□□□ 0.58
Pabpc4-201ENSMUST00000078734 Crybg2B7ZCC2 1516 aa18.64■□□□□ 0.58
Pabpc4-201ENSMUST00000078734 Atad2bE9Q166 1460 aaKnown RBP18.56■□□□□ 0.56
Pabpc4-201ENSMUST00000078734 Cc2d2aQ8CFW7 1633 aa18.49■□□□□ 0.55
Pabpc4-201ENSMUST00000078734 Cecr2E9Q2Z1 1453 aa18.46■□□□□ 0.55
Pabpc4-201ENSMUST00000078734 Smarca2Q6DIC0 1577 aa18.41■□□□□ 0.54
Pabpc4-201ENSMUST00000078734 Smarca4Q3TKT4 1613 aaKnown RBP18.41■□□□□ 0.54
Pabpc4-201ENSMUST00000078734 Ercc6F8VPZ5 1481 aa18.37■□□□□ 0.53
Pabpc4-201ENSMUST00000078734 Iqgap2Q3UQ44 1575 aa18.37■□□□□ 0.53
Pabpc4-201ENSMUST00000078734 Fam135aQ6NS59 1506 aa18.24■□□□□ 0.51
Pabpc4-201ENSMUST00000078734 Frmpd1A2AKB4 1549 aa18.22■□□□□ 0.51
Pabpc4-201ENSMUST00000078734 Wdr62Q3U3T8 1523 aa18.21■□□□□ 0.51
Pabpc4-201ENSMUST00000078734 Unc13aQ4KUS2 1712 aa18.07■□□□□ 0.48
Pabpc4-201ENSMUST00000078734 Phldb1Q6PDH0 1371 aaKnown RBP18.04■□□□□ 0.48
Pabpc4-201ENSMUST00000078734 Rtl1Q7M732 1744 aa18.02■□□□□ 0.48
Pabpc4-201ENSMUST00000078734 Ubl4bQ9CQ84 188 aa17.96■□□□□ 0.47
Pabpc4-201ENSMUST00000078734 Synj1Q8CHC4 1574 aa17.92■□□□□ 0.46
Pabpc4-201ENSMUST00000078734 CftrP26361 1476 aa17.9■□□□□ 0.46
Pabpc4-201ENSMUST00000078734 Ccdc136Q3TVA9 1136 aa17.87■□□□□ 0.45
Pabpc4-201ENSMUST00000078734 Cttnbp2B9EJA2 1648 aa17.85■□□□□ 0.45
Pabpc4-201ENSMUST00000078734 Mrc2Q64449 1479 aa17.82■□□□□ 0.44
Pabpc4-201ENSMUST00000078734 Rpgrip1Q9EPQ2 1331 aa17.81■□□□□ 0.44
Pabpc4-201ENSMUST00000078734 Baz1bQ9Z277 1479 aa17.72■□□□□ 0.43
Pabpc4-201ENSMUST00000078734 Brd4Q9ESU6 1400 aaKnown RBP17.71■□□□□ 0.43
Pabpc4-201ENSMUST00000078734 Ehmt2Q9Z148 1263 aaKnown RBP17.63■□□□□ 0.41
Pabpc4-201ENSMUST00000078734 Trim41Q5NCC3 630 aa17.62■□□□□ 0.41
Pabpc4-201ENSMUST00000078734 Esf1Q3V1V3 845 aaKnown RBP17.59■□□□□ 0.41
Pabpc4-201ENSMUST00000078734 Lrriq1Q0P5X1 1673 aa17.54■□□□□ 0.4
Pabpc4-201ENSMUST00000078734 Cux2P70298 1426 aa17.53■□□□□ 0.4
Pabpc4-201ENSMUST00000078734 Kif15Q6P9L6 1387 aa17.52■□□□□ 0.4
Pabpc4-201ENSMUST00000078734 Kif21aQ9QXL2 1672 aa17.51■□□□□ 0.39
Pabpc4-201ENSMUST00000078734 Acin1Q9JIX8 1338 aaKnown RBP17.48■□□□□ 0.39
Pabpc4-201ENSMUST00000078734 Rsf1E9PWW9 1441 aaKnown RBP17.45■□□□□ 0.38
Pabpc4-201ENSMUST00000078734 Lamc3Q9R0B6 1581 aa17.37■□□□□ 0.37
Pabpc4-201ENSMUST00000078734 Dnajc5P60904 198 aa17.35■□□□□ 0.37
Pabpc4-201ENSMUST00000078734 Pcgf6Q99NA9 353 aa17.33■□□□□ 0.36
Pabpc4-201ENSMUST00000078734 Npm1Q61937 292 aaKnown RBP17.27■□□□□ 0.36
Pabpc4-201ENSMUST00000078734 Il27Q8K3I6 234 aa17.26■□□□□ 0.35
Pabpc4-201ENSMUST00000078734 Eif4g3Q80XI3 1579 aaKnown RBP17.21■□□□□ 0.35
Pabpc4-201ENSMUST00000078734 Urb2E9Q7L1 1524 aaKnown RBP17.18■□□□□ 0.34
Pabpc4-201ENSMUST00000078734 Cep164Q5DU05 1446 aa17.17■□□□□ 0.34
Pabpc4-201ENSMUST00000078734 Cngb1E1AZ71 1325 aa17.17■□□□□ 0.34
Pabpc4-201ENSMUST00000078734 Plb1Q3TTY0 1478 aa17.16■□□□□ 0.34
Pabpc4-201ENSMUST00000078734 TnnQ80Z71 1560 aa17.15■□□□□ 0.34
Pabpc4-201ENSMUST00000078734 Dhx29Q6PGC1 1365 aaKnown RBP17.15■□□□□ 0.34
Pabpc4-201ENSMUST00000078734 Top2bQ64511 1612 aa17.15■□□□□ 0.34
Pabpc4-201ENSMUST00000078734 Golga3P55937 1487 aa17.1■□□□□ 0.33
Pabpc4-201ENSMUST00000078734 Camsap1A2AHC3 1581 aa17.1■□□□□ 0.33
Pabpc4-201ENSMUST00000078734 Ccdc18Q640L5 1455 aa17.06■□□□□ 0.32
Pabpc4-201ENSMUST00000078734 Crocc2F6XLV1 1638 aa17.06■□□□□ 0.32
Pabpc4-201ENSMUST00000078734 LrpprcQ6PB66 1392 aaKnown RBP17.05■□□□□ 0.32
Pabpc4-201ENSMUST00000078734 Shroom2A2ALU4 1481 aa17.01■□□□□ 0.31
Pabpc4-201ENSMUST00000078734 HrcG5E8J6 738 aa17.01■□□□□ 0.31
Pabpc4-201ENSMUST00000078734 PogzQ8BZH4 1409 aaKnown RBP16.95■□□□□ 0.3
Pabpc4-201ENSMUST00000078734 Rusc2Q80U22 1514 aa16.91■□□□□ 0.3
Pabpc4-201ENSMUST00000078734 Fmn1Q05860 1466 aa16.91■□□□□ 0.3
Pabpc4-201ENSMUST00000078734 Duox2A2AQ99 1517 aa16.9■□□□□ 0.3
Pabpc4-201ENSMUST00000078734 Col17a1Q07563 1470 aa16.89■□□□□ 0.29
Pabpc4-201ENSMUST00000078734 Setd1bQ8CFT2 1985 aa16.88■□□□□ 0.29
Pabpc4-201ENSMUST00000078734 Pelp1Q9DBD5 1123 aaKnown RBP16.87■□□□□ 0.29
Pabpc4-201ENSMUST00000078734 Supt5hO55201 1082 aaKnown RBP16.87■□□□□ 0.29
Pabpc4-201ENSMUST00000078734 Ift140E9PY46 1464 aa16.86■□□□□ 0.29
Pabpc4-201ENSMUST00000078734 Samd9lQ69Z37 1561 aa16.86■□□□□ 0.29
Pabpc4-201ENSMUST00000078734 Pabpn1Q8CCS6 302 aaKnown RBP16.84■□□□□ 0.29
Pabpc4-201ENSMUST00000078734 Grin2bQ01097 1482 aa16.83■□□□□ 0.28
Pabpc4-201ENSMUST00000078734 Disp1Q3TDN0 1521 aa16.82■□□□□ 0.28
Pabpc4-201ENSMUST00000078734 Neurod1Q60867 357 aa16.8■□□□□ 0.28
Pabpc4-201ENSMUST00000078734 Ccdc88bQ4QRL3 1481 aa16.77■□□□□ 0.28
Pabpc4-201ENSMUST00000078734 Rad54l2Q99NG0 1466 aa16.76■□□□□ 0.27
Pabpc4-201ENSMUST00000078734 Nup160Q9Z0W3 1402 aaKnown RBP16.71■□□□□ 0.27
Pabpc4-201ENSMUST00000078734 Chic1Q8CBW7 227 aa16.69■□□□□ 0.26
Pabpc4-201ENSMUST00000078734 Magi3Q9EQJ9 1476 aa16.66■□□□□ 0.26
Pabpc4-201ENSMUST00000078734 PtprkP35822 1457 aa16.64■□□□□ 0.25
Pabpc4-201ENSMUST00000078734 Grin2aP35436 1464 aa16.63■□□□□ 0.25
Pabpc4-201ENSMUST00000078734 Efcab5A0JP43 1406 aa16.63■□□□□ 0.25
Pabpc4-201ENSMUST00000078734 Pbrm1Q8BSQ9 1634 aaKnown RBP16.62■□□□□ 0.25
Pabpc4-201ENSMUST00000078734 Cc2d2bA0A286YDU8 1405 aa16.62■□□□□ 0.25
Pabpc4-201ENSMUST00000078734 Top2aQ01320 1528 aaKnown RBP16.61■□□□□ 0.25
Pabpc4-201ENSMUST00000078734 Zcchc11B2RX14 1644 aaKnown RBP16.57■□□□□ 0.24
Pabpc4-201ENSMUST00000078734 AqrQ8CFQ3 1481 aaKnown RBP16.55■□□□□ 0.24
Pabpc4-201ENSMUST00000078734 Pla2r1Q62028 1487 aa16.55■□□□□ 0.24
Pabpc4-201ENSMUST00000078734 NrkQ9R0G8 1455 aa16.53■□□□□ 0.24
Pabpc4-201ENSMUST00000078734 Pcdh10E9PXQ7 1057 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms