RNA–Protein interactions for RNA: ENSMUST00000066133.6

Apc-201, Transcript of Adenomatous polyposis coli protein, mousemouse

TSL 1 (best) BASIC

Gene Apc, Length 1,185 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Apc-201ENSMUST00000066133 Mapk8ip2Q9ERE9 830 aa28.4■■■□□ 2.14
Apc-201ENSMUST00000066133 Chic1Q8CBW7 227 aa28.16■■■□□ 2.1
Apc-201ENSMUST00000066133 Gm35339A0A140LHH9 1649 aa27.7■■■□□ 2.03
Apc-201ENSMUST00000066133 NischQ80TM9 1593 aa27.18■■□□□ 1.94
Apc-201ENSMUST00000066133 Abcc8B2RUS7 1588 aa26.42■■□□□ 1.82
Apc-201ENSMUST00000066133 Abcc9P70170 1546 aa26.32■■□□□ 1.8
Apc-201ENSMUST00000066133 ScribQ80U72 1612 aa25.71■■□□□ 1.71
Apc-201ENSMUST00000066133 Phf23Q8BSN5 401 aa25.17■■□□□ 1.62
Apc-201ENSMUST00000066133 NacadQ5SWP3 1504 aa24.9■■□□□ 1.58
Apc-201ENSMUST00000066133 Kdm5dQ62240 1548 aa24.77■■□□□ 1.56
Apc-201ENSMUST00000066133 Sycp2Q9CUU3 1500 aa24.43■■□□□ 1.5
Apc-201ENSMUST00000066133 Dcaf1Q80TR8 1506 aa24.21■■□□□ 1.47
Apc-201ENSMUST00000066133 Dnajc5bQ9CQ94 199 aa24.21■■□□□ 1.47
Apc-201ENSMUST00000066133 BicraF8VPZ9 1578 aa24.14■■□□□ 1.45
Apc-201ENSMUST00000066133 Gab3Q8BSM5 595 aa23.87■■□□□ 1.41
Apc-201ENSMUST00000066133 Pds5bQ4VA53 1446 aaKnown RBP23.62■■□□□ 1.37
Apc-201ENSMUST00000066133 Rb1cc1Q9ESK9 1588 aa23.61■■□□□ 1.37
Apc-201ENSMUST00000066133 Plppr3Q7TPB0 716 aa23.6■■□□□ 1.37
Apc-201ENSMUST00000066133 Thoc2B1AZI6 1594 aaKnown RBP23.54■■□□□ 1.36
Apc-201ENSMUST00000066133 Crybg2B7ZCC2 1516 aa23.33■■□□□ 1.32
Apc-201ENSMUST00000066133 Atad2bE9Q166 1460 aaKnown RBP23.28■■□□□ 1.32
Apc-201ENSMUST00000066133 Baz1aO88379 1555 aa23.27■■□□□ 1.32
Apc-201ENSMUST00000066133 Ccdc180J3QNE4 1664 aa23.17■■□□□ 1.3
Apc-201ENSMUST00000066133 Cc2d2aQ8CFW7 1633 aa23.13■■□□□ 1.29
Apc-201ENSMUST00000066133 Ercc6F8VPZ5 1481 aa23.06■■□□□ 1.28
Apc-201ENSMUST00000066133 Rhox8Q6VSS7 320 aa23.02■■□□□ 1.28
Apc-201ENSMUST00000066133 Zcchc6Q5BLK4 1491 aaKnown RBP23.02■■□□□ 1.28
Apc-201ENSMUST00000066133 Smarca2Q6DIC0 1577 aa22.94■■□□□ 1.26
Apc-201ENSMUST00000066133 Fam135aQ6NS59 1506 aa22.92■■□□□ 1.26
Apc-201ENSMUST00000066133 Smarca4Q3TKT4 1613 aaKnown RBP22.86■■□□□ 1.25
Apc-201ENSMUST00000066133 Iqgap2Q3UQ44 1575 aa22.8■■□□□ 1.24
Apc-201ENSMUST00000066133 Senp3Q9EP97 568 aaKnown RBP22.75■■□□□ 1.23
Apc-201ENSMUST00000066133 Baz1bQ9Z277 1479 aa22.72■■□□□ 1.23
Apc-201ENSMUST00000066133 Phldb1Q6PDH0 1371 aaKnown RBP22.71■■□□□ 1.23
Apc-201ENSMUST00000066133 Wdr62Q3U3T8 1523 aa22.71■■□□□ 1.23
Apc-201ENSMUST00000066133 Frmpd1A2AKB4 1549 aa22.68■■□□□ 1.22
Apc-201ENSMUST00000066133 Cecr2E9Q2Z1 1453 aa22.68■■□□□ 1.22
Apc-201ENSMUST00000066133 Ubl4bQ9CQ84 188 aa22.53■■□□□ 1.2
Apc-201ENSMUST00000066133 Dnajc5P60904 198 aa22.41■■□□□ 1.18
Apc-201ENSMUST00000066133 Mrc2Q64449 1479 aa22.41■■□□□ 1.18
Apc-201ENSMUST00000066133 Unc13aQ4KUS2 1712 aa22.25■■□□□ 1.15
Apc-201ENSMUST00000066133 Trim41Q5NCC3 630 aa22.15■■□□□ 1.14
Apc-201ENSMUST00000066133 CftrP26361 1476 aa22.1■■□□□ 1.13
Apc-201ENSMUST00000066133 Cttnbp2B9EJA2 1648 aa22.02■■□□□ 1.12
Apc-201ENSMUST00000066133 Synj1Q8CHC4 1574 aa21.95■■□□□ 1.11
Apc-201ENSMUST00000066133 Brd4Q9ESU6 1400 aaKnown RBP21.92■■□□□ 1.1
Apc-201ENSMUST00000066133 Lrriq1Q0P5X1 1673 aa21.89■■□□□ 1.1
Apc-201ENSMUST00000066133 Rsf1E9PWW9 1441 aaKnown RBP21.87■■□□□ 1.09
Apc-201ENSMUST00000066133 Cux2P70298 1426 aa21.82■■□□□ 1.08
Apc-201ENSMUST00000066133 Kif15Q6P9L6 1387 aa21.74■■□□□ 1.07
Apc-201ENSMUST00000066133 Esf1Q3V1V3 845 aaKnown RBP21.69■■□□□ 1.06
Apc-201ENSMUST00000066133 Kif21aQ9QXL2 1672 aa21.69■■□□□ 1.06
Apc-201ENSMUST00000066133 Rtl1Q7M732 1744 aa21.66■■□□□ 1.06
Apc-201ENSMUST00000066133 Shroom2A2ALU4 1481 aa21.65■■□□□ 1.06
Apc-201ENSMUST00000066133 Ccdc136Q3TVA9 1136 aa21.65■■□□□ 1.06
Apc-201ENSMUST00000066133 Npm1Q61937 292 aaKnown RBP21.59■■□□□ 1.05
Apc-201ENSMUST00000066133 Eif4g3Q80XI3 1579 aaKnown RBP21.59■■□□□ 1.05
Apc-201ENSMUST00000066133 Lamc3Q9R0B6 1581 aa21.54■■□□□ 1.04
Apc-201ENSMUST00000066133 Cep164Q5DU05 1446 aa21.46■■□□□ 1.03
Apc-201ENSMUST00000066133 Fam163aQ8CAA5 168 aa21.44■■□□□ 1.02
Apc-201ENSMUST00000066133 Col17a1Q07563 1470 aa21.44■■□□□ 1.02
Apc-201ENSMUST00000066133 Urb2E9Q7L1 1524 aaKnown RBP21.39■■□□□ 1.01
Apc-201ENSMUST00000066133 Pabpn1Q8CCS6 302 aaKnown RBP21.37■■□□□ 1.01
Apc-201ENSMUST00000066133 Plb1Q3TTY0 1478 aa21.35■■□□□ 1.01
Apc-201ENSMUST00000066133 Dhx29Q6PGC1 1365 aaKnown RBP21.34■■□□□ 1.01
Apc-201ENSMUST00000066133 Top2bQ64511 1612 aa21.28■■□□□ 1
Apc-201ENSMUST00000066133 Ccdc18Q640L5 1455 aa21.26■□□□□ 0.99
Apc-201ENSMUST00000066133 LrpprcQ6PB66 1392 aaKnown RBP21.23■□□□□ 0.99
Apc-201ENSMUST00000066133 Il27Q8K3I6 234 aa21.2■□□□□ 0.98
Apc-201ENSMUST00000066133 Crocc2F6XLV1 1638 aa21.18■□□□□ 0.98
Apc-201ENSMUST00000066133 Ift140E9PY46 1464 aa21.14■□□□□ 0.98
Apc-201ENSMUST00000066133 Pelp1Q9DBD5 1123 aaKnown RBP21.14■□□□□ 0.97
Apc-201ENSMUST00000066133 TnnQ80Z71 1560 aa21.14■□□□□ 0.97
Apc-201ENSMUST00000066133 Rusc2Q80U22 1514 aa21.13■□□□□ 0.97
Apc-201ENSMUST00000066133 Zcchc11B2RX14 1644 aaKnown RBP21.1■□□□□ 0.97
Apc-201ENSMUST00000066133 Camsap1A2AHC3 1581 aa21.08■□□□□ 0.97
Apc-201ENSMUST00000066133 PogzQ8BZH4 1409 aaKnown RBP21.06■□□□□ 0.96
Apc-201ENSMUST00000066133 Golga3P55937 1487 aa20.95■□□□□ 0.94
Apc-201ENSMUST00000066133 Duox2A2AQ99 1517 aa20.94■□□□□ 0.94
Apc-201ENSMUST00000066133 Disp1Q3TDN0 1521 aa20.92■□□□□ 0.94
Apc-201ENSMUST00000066133 Cngb1E1AZ71 1325 aa20.86■□□□□ 0.93
Apc-201ENSMUST00000066133 Cc2d2bA0A286YDU8 1405 aa20.86■□□□□ 0.93
Apc-201ENSMUST00000066133 Nup160Q9Z0W3 1402 aaKnown RBP20.85■□□□□ 0.93
Apc-201ENSMUST00000066133 Kcna4Q61423 654 aa20.83■□□□□ 0.93
Apc-201ENSMUST00000066133 Pcdh10E9PXQ7 1057 aa20.82■□□□□ 0.92
Apc-201ENSMUST00000066133 Fmn1Q05860 1466 aa20.81■□□□□ 0.92
Apc-201ENSMUST00000066133 Adgrl3Q80TS3 1537 aa20.8■□□□□ 0.92
Apc-201ENSMUST00000066133 Grin2bQ01097 1482 aa20.79■□□□□ 0.92
Apc-201ENSMUST00000066133 Pbrm1Q8BSQ9 1634 aaKnown RBP20.77■□□□□ 0.92
Apc-201ENSMUST00000066133 Arhgef5E9Q7D5 1581 aa20.76■□□□□ 0.91
Apc-201ENSMUST00000066133 PtprkP35822 1457 aa20.75■□□□□ 0.91
Apc-201ENSMUST00000066133 Efcab5A0JP43 1406 aa20.72■□□□□ 0.91
Apc-201ENSMUST00000066133 Samd9lQ69Z37 1561 aa20.72■□□□□ 0.91
Apc-201ENSMUST00000066133 Gm156Q58A37 223 aa20.71■□□□□ 0.91
Apc-201ENSMUST00000066133 Fgd6Q69ZL1 1399 aa20.71■□□□□ 0.91
Apc-201ENSMUST00000066133 Ttbk1Q6PCN3 1308 aa20.7■□□□□ 0.9
Apc-201ENSMUST00000066133 Setd1bQ8CFT2 1985 aa20.69■□□□□ 0.9
Apc-201ENSMUST00000066133 Cep170Q6A065 1588 aa20.68■□□□□ 0.9
Apc-201ENSMUST00000066133 Gapvd1Q6PAR5 1458 aa20.67■□□□□ 0.9
Apc-201ENSMUST00000066133 AqrQ8CFQ3 1481 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms