RNA–Protein interactions for RNA: ENSMUST00000060797.9

Casc1-201, Transcript of Protein CASC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Casc1, Length 2,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1-201ENSMUST00000060797 NischQ80TM9 1593 aa17.64■□□□□ 0.41
Casc1-201ENSMUST00000060797 Gm35339A0A140LHH9 1649 aa17.47■□□□□ 0.39
Casc1-201ENSMUST00000060797 Abcc9P70170 1546 aa17.15■□□□□ 0.34
Casc1-201ENSMUST00000060797 Abcc8B2RUS7 1588 aa16.82■□□□□ 0.28
Casc1-201ENSMUST00000060797 Rhox8Q6VSS7 320 aa16.07■□□□□ 0.16
Casc1-201ENSMUST00000060797 ScribQ80U72 1612 aa15.85■□□□□ 0.13
Casc1-201ENSMUST00000060797 Rtl1Q7M732 1744 aa15.72■□□□□ 0.11
Casc1-201ENSMUST00000060797 Dcaf1Q80TR8 1506 aa15.59■□□□□ 0.09
Casc1-201ENSMUST00000060797 Rb1cc1Q9ESK9 1588 aa15.46■□□□□ 0.06
Casc1-201ENSMUST00000060797 Kdm5dQ62240 1548 aa15.45■□□□□ 0.06
Casc1-201ENSMUST00000060797 Ccdc180J3QNE4 1664 aa15.4■□□□□ 0.06
Casc1-201ENSMUST00000060797 Zcchc6Q5BLK4 1491 aaKnown RBP15.39■□□□□ 0.05
Casc1-201ENSMUST00000060797 NacadQ5SWP3 1504 aa15.26■□□□□ 0.03
Casc1-201ENSMUST00000060797 Baz1aO88379 1555 aa15.25■□□□□ 0.03
Casc1-201ENSMUST00000060797 Sycp2Q9CUU3 1500 aa14.98□□□□□ -0.01
Casc1-201ENSMUST00000060797 Ccdc136Q3TVA9 1136 aa14.97□□□□□ -0.01
Casc1-201ENSMUST00000060797 Crybg2B7ZCC2 1516 aa14.93□□□□□ -0.02
Casc1-201ENSMUST00000060797 Smarca2Q6DIC0 1577 aa14.93□□□□□ -0.02
Casc1-201ENSMUST00000060797 BicraF8VPZ9 1578 aa14.75□□□□□ -0.05
Casc1-201ENSMUST00000060797 HrcG5E8J6 738 aa14.65□□□□□ -0.06
Casc1-201ENSMUST00000060797 Cecr2E9Q2Z1 1453 aa14.64□□□□□ -0.07
Casc1-201ENSMUST00000060797 Trim41Q5NCC3 630 aa14.56□□□□□ -0.08
Casc1-201ENSMUST00000060797 Synj1Q8CHC4 1574 aa14.47□□□□□ -0.09
Casc1-201ENSMUST00000060797 Brd4Q9ESU6 1400 aaKnown RBP14.44□□□□□ -0.1
Casc1-201ENSMUST00000060797 CftrP26361 1476 aa14.36□□□□□ -0.11
Casc1-201ENSMUST00000060797 Cep164Q5DU05 1446 aa14.36□□□□□ -0.11
Casc1-201ENSMUST00000060797 Rsf1E9PWW9 1441 aaKnown RBP14.34□□□□□ -0.11
Casc1-201ENSMUST00000060797 Ehmt2Q9Z148 1263 aaKnown RBP14.3□□□□□ -0.12
Casc1-201ENSMUST00000060797 Golga3P55937 1487 aa14.3□□□□□ -0.12
Casc1-201ENSMUST00000060797 Chic1Q8CBW7 227 aa14.29□□□□□ -0.12
Casc1-201ENSMUST00000060797 Cngb1E1AZ71 1325 aa14.29□□□□□ -0.12
Casc1-201ENSMUST00000060797 Smarca4Q3TKT4 1613 aaKnown RBP14.29□□□□□ -0.12
Casc1-201ENSMUST00000060797 Cttnbp2B9EJA2 1648 aa14.29□□□□□ -0.12
Casc1-201ENSMUST00000060797 Ccdc88bQ4QRL3 1481 aa14.28□□□□□ -0.12
Casc1-201ENSMUST00000060797 Top2bQ64511 1612 aa14.23□□□□□ -0.13
Casc1-201ENSMUST00000060797 Cc2d2aQ8CFW7 1633 aa14.13□□□□□ -0.15
Casc1-201ENSMUST00000060797 Iqgap2Q3UQ44 1575 aa14.13□□□□□ -0.15
Casc1-201ENSMUST00000060797 Esf1Q3V1V3 845 aaKnown RBP14.11□□□□□ -0.15
Casc1-201ENSMUST00000060797 Acin1Q9JIX8 1338 aaKnown RBP14.1□□□□□ -0.15
Casc1-201ENSMUST00000060797 Gab3Q8BSM5 595 aa14.08□□□□□ -0.16
Casc1-201ENSMUST00000060797 Atad2bE9Q166 1460 aaKnown RBP14.04□□□□□ -0.16
Casc1-201ENSMUST00000060797 Rpgrip1Q9EPQ2 1331 aa14.02□□□□□ -0.17
Casc1-201ENSMUST00000060797 Pds5bQ4VA53 1446 aaKnown RBP13.95□□□□□ -0.18
Casc1-201ENSMUST00000060797 Fmn1Q05860 1466 aa13.94□□□□□ -0.18
Casc1-201ENSMUST00000060797 Top2aQ01320 1528 aaKnown RBP13.91□□□□□ -0.18
Casc1-201ENSMUST00000060797 Frmpd1A2AKB4 1549 aa13.88□□□□□ -0.19
Casc1-201ENSMUST00000060797 Wdr62Q3U3T8 1523 aa13.87□□□□□ -0.19
Casc1-201ENSMUST00000060797 Rapgef2Q8CHG7 1496 aa13.83□□□□□ -0.19
Casc1-201ENSMUST00000060797 TnnQ80Z71 1560 aa13.83□□□□□ -0.2
Casc1-201ENSMUST00000060797 Unc13aQ4KUS2 1712 aa13.82□□□□□ -0.2
Casc1-201ENSMUST00000060797 Lamc3Q9R0B6 1581 aa13.71□□□□□ -0.21
Casc1-201ENSMUST00000060797 Cep162Q6ZQ06 1403 aa13.71□□□□□ -0.21
Casc1-201ENSMUST00000060797 Eif4g1Q6NZJ6 1600 aaKnown RBP13.71□□□□□ -0.21
Casc1-201ENSMUST00000060797 Ercc6F8VPZ5 1481 aa13.7□□□□□ -0.22
Casc1-201ENSMUST00000060797 Thoc2B1AZI6 1594 aaKnown RBP13.65□□□□□ -0.22
Casc1-201ENSMUST00000060797 PtprkP35822 1457 aa13.64□□□□□ -0.23
Casc1-201ENSMUST00000060797 Kif15Q6P9L6 1387 aa13.62□□□□□ -0.23
Casc1-201ENSMUST00000060797 Camsap1A2AHC3 1581 aa13.6□□□□□ -0.23
Casc1-201ENSMUST00000060797 Myt1lP97500 1187 aa13.57□□□□□ -0.24
Casc1-201ENSMUST00000060797 Arhgap35Q91YM2 1499 aa13.56□□□□□ -0.24
Casc1-201ENSMUST00000060797 Mier1Q5UAK0 511 aa13.55□□□□□ -0.24
Casc1-201ENSMUST00000060797 Npm2Q80W85 207 aa13.54□□□□□ -0.24
Casc1-201ENSMUST00000060797 NrkQ9R0G8 1455 aa13.54□□□□□ -0.24
Casc1-201ENSMUST00000060797 Il27Q8K3I6 234 aa13.53□□□□□ -0.24
Casc1-201ENSMUST00000060797 Shroom4Q1W617 1475 aa13.5□□□□□ -0.25
Casc1-201ENSMUST00000060797 Phldb1Q6PDH0 1371 aaKnown RBP13.49□□□□□ -0.25
Casc1-201ENSMUST00000060797 Grin2bQ01097 1482 aa13.48□□□□□ -0.25
Casc1-201ENSMUST00000060797 Fam135aQ6NS59 1506 aa13.46□□□□□ -0.25
Casc1-201ENSMUST00000060797 Cux2P70298 1426 aa13.44□□□□□ -0.26
Casc1-201ENSMUST00000060797 UbtfP25976 765 aaKnown RBP13.43□□□□□ -0.26
Casc1-201ENSMUST00000060797 Ccdc18Q640L5 1455 aa13.43□□□□□ -0.26
Casc1-201ENSMUST00000060797 Clip1Q922J3 1391 aa13.42□□□□□ -0.26
Casc1-201ENSMUST00000060797 Pcgf6Q99NA9 353 aa13.41□□□□□ -0.26
Casc1-201ENSMUST00000060797 Arap1Q4LDD4 1452 aa13.41□□□□□ -0.26
Casc1-201ENSMUST00000060797 Map3k1P53349 1493 aa13.39□□□□□ -0.27
Casc1-201ENSMUST00000060797 Ubl4bQ9CQ84 188 aa13.38□□□□□ -0.27
Casc1-201ENSMUST00000060797 Plekhg3Q4VAC9 1341 aa13.38□□□□□ -0.27
Casc1-201ENSMUST00000060797 Mroh2bQ7M6Y6 1581 aa13.37□□□□□ -0.27
Casc1-201ENSMUST00000060797 Baz1bQ9Z277 1479 aa13.35□□□□□ -0.27
Casc1-201ENSMUST00000060797 Supt5hO55201 1082 aaKnown RBP13.33□□□□□ -0.27
Casc1-201ENSMUST00000060797 Arhgef5E9Q7D5 1581 aa13.32□□□□□ -0.28
Casc1-201ENSMUST00000060797 Eea1Q8BL66 1411 aa13.31□□□□□ -0.28
Casc1-201ENSMUST00000060797 Ankrd26Q811D2 1581 aa13.31□□□□□ -0.28
Casc1-201ENSMUST00000060797 NefmP08553 848 aa13.3□□□□□ -0.28
Casc1-201ENSMUST00000060797 LrpprcQ6PB66 1392 aaKnown RBP13.3□□□□□ -0.28
Casc1-201ENSMUST00000060797 PogzQ8BZH4 1409 aaKnown RBP13.3□□□□□ -0.28
Casc1-201ENSMUST00000060797 Duox2A2AQ99 1517 aa13.29□□□□□ -0.28
Casc1-201ENSMUST00000060797 Erich3F6QRE9 1637 aa13.29□□□□□ -0.28
Casc1-201ENSMUST00000060797 Setd5Q5XJV7 1441 aa13.28□□□□□ -0.28
Casc1-201ENSMUST00000060797 Samd9lQ69Z37 1561 aa13.28□□□□□ -0.28
Casc1-201ENSMUST00000060797 Ncapd3Q6ZQK0 1506 aa13.27□□□□□ -0.28
Casc1-201ENSMUST00000060797 Zeb1Q64318 1117 aa13.27□□□□□ -0.29
Casc1-201ENSMUST00000060797 Ap3b1Q9Z1T1 1105 aa13.27□□□□□ -0.29
Casc1-201ENSMUST00000060797 Npm1Q61937 292 aaKnown RBP13.27□□□□□ -0.29
Casc1-201ENSMUST00000060797 Dnajc5bQ9CQ94 199 aa13.27□□□□□ -0.29
Casc1-201ENSMUST00000060797 Efcab5A0JP43 1406 aa13.26□□□□□ -0.29
Casc1-201ENSMUST00000060797 AqrQ8CFQ3 1481 aaKnown RBP13.26□□□□□ -0.29
Casc1-201ENSMUST00000060797 Cux1P53564 1515 aa13.25□□□□□ -0.29
Casc1-201ENSMUST00000060797 Pcf11G3X9Z4 1553 aa13.24□□□□□ -0.29
Casc1-201ENSMUST00000060797 Tiam1Q60610 1591 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms