RNA–Protein interactions for RNA: ENSMUST00000048565.8

Trim60-201, Transcript of Tripartite motif-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim60, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60-201ENSMUST00000048565 NischQ80TM9 1593 aa14.84□□□□□ -0.03
Trim60-201ENSMUST00000048565 Chic1Q8CBW7 227 aa14.79□□□□□ -0.04
Trim60-201ENSMUST00000048565 Gm35339A0A140LHH9 1649 aa14.76□□□□□ -0.05
Trim60-201ENSMUST00000048565 Abcc9P70170 1546 aa14.46□□□□□ -0.09
Trim60-201ENSMUST00000048565 Abcc8B2RUS7 1588 aa14.15□□□□□ -0.14
Trim60-201ENSMUST00000048565 Mapk8ip2Q9ERE9 830 aa13.97□□□□□ -0.17
Trim60-201ENSMUST00000048565 Rhox8Q6VSS7 320 aa13.45□□□□□ -0.26
Trim60-201ENSMUST00000048565 Phf23Q8BSN5 401 aa13.44□□□□□ -0.26
Trim60-201ENSMUST00000048565 Rtl1Q7M732 1744 aa13.35□□□□□ -0.27
Trim60-201ENSMUST00000048565 ScribQ80U72 1612 aa13.31□□□□□ -0.28
Trim60-201ENSMUST00000048565 Plppr3Q7TPB0 716 aa13.27□□□□□ -0.29
Trim60-201ENSMUST00000048565 Dcaf1Q80TR8 1506 aa13.18□□□□□ -0.3
Trim60-201ENSMUST00000048565 Ccdc180J3QNE4 1664 aa13.02□□□□□ -0.32
Trim60-201ENSMUST00000048565 Rb1cc1Q9ESK9 1588 aa13.02□□□□□ -0.33
Trim60-201ENSMUST00000048565 Kdm5dQ62240 1548 aa13□□□□□ -0.33
Trim60-201ENSMUST00000048565 Gab3Q8BSM5 595 aa12.94□□□□□ -0.34
Trim60-201ENSMUST00000048565 Zcchc6Q5BLK4 1491 aaKnown RBP12.93□□□□□ -0.34
Trim60-201ENSMUST00000048565 NacadQ5SWP3 1504 aa12.87□□□□□ -0.35
Trim60-201ENSMUST00000048565 Baz1aO88379 1555 aa12.86□□□□□ -0.35
Trim60-201ENSMUST00000048565 Sycp2Q9CUU3 1500 aa12.61□□□□□ -0.39
Trim60-201ENSMUST00000048565 Crybg2B7ZCC2 1516 aa12.61□□□□□ -0.39
Trim60-201ENSMUST00000048565 Smarca2Q6DIC0 1577 aa12.58□□□□□ -0.4
Trim60-201ENSMUST00000048565 Kcna4Q61423 654 aa12.51□□□□□ -0.41
Trim60-201ENSMUST00000048565 Ccdc136Q3TVA9 1136 aa12.48□□□□□ -0.41
Trim60-201ENSMUST00000048565 Senp3Q9EP97 568 aaKnown RBP12.46□□□□□ -0.41
Trim60-201ENSMUST00000048565 BicraF8VPZ9 1578 aa12.37□□□□□ -0.43
Trim60-201ENSMUST00000048565 HrcG5E8J6 738 aa12.31□□□□□ -0.44
Trim60-201ENSMUST00000048565 Cecr2E9Q2Z1 1453 aa12.26□□□□□ -0.45
Trim60-201ENSMUST00000048565 Trim41Q5NCC3 630 aa12.23□□□□□ -0.45
Trim60-201ENSMUST00000048565 Brd4Q9ESU6 1400 aaKnown RBP12.18□□□□□ -0.46
Trim60-201ENSMUST00000048565 Synj1Q8CHC4 1574 aa12.17□□□□□ -0.46
Trim60-201ENSMUST00000048565 Cep164Q5DU05 1446 aa12.09□□□□□ -0.47
Trim60-201ENSMUST00000048565 CftrP26361 1476 aa12.07□□□□□ -0.48
Trim60-201ENSMUST00000048565 Cttnbp2B9EJA2 1648 aa12.06□□□□□ -0.48
Trim60-201ENSMUST00000048565 Smarca4Q3TKT4 1613 aaKnown RBP12.05□□□□□ -0.48
Trim60-201ENSMUST00000048565 Golga3P55937 1487 aa12.03□□□□□ -0.48
Trim60-201ENSMUST00000048565 Rsf1E9PWW9 1441 aaKnown RBP12□□□□□ -0.49
Trim60-201ENSMUST00000048565 Top2bQ64511 1612 aa11.99□□□□□ -0.49
Trim60-201ENSMUST00000048565 Cngb1E1AZ71 1325 aa11.98□□□□□ -0.49
Trim60-201ENSMUST00000048565 Ccdc88bQ4QRL3 1481 aa11.95□□□□□ -0.5
Trim60-201ENSMUST00000048565 Iqgap2Q3UQ44 1575 aa11.9□□□□□ -0.5
Trim60-201ENSMUST00000048565 Cc2d2aQ8CFW7 1633 aa11.88□□□□□ -0.51
Trim60-201ENSMUST00000048565 Ehmt2Q9Z148 1263 aaKnown RBP11.88□□□□□ -0.51
Trim60-201ENSMUST00000048565 Rpgrip1Q9EPQ2 1331 aa11.86□□□□□ -0.51
Trim60-201ENSMUST00000048565 Esf1Q3V1V3 845 aaKnown RBP11.83□□□□□ -0.52
Trim60-201ENSMUST00000048565 Acin1Q9JIX8 1338 aaKnown RBP11.83□□□□□ -0.52
Trim60-201ENSMUST00000048565 Atad2bE9Q166 1460 aaKnown RBP11.82□□□□□ -0.52
Trim60-201ENSMUST00000048565 Pds5bQ4VA53 1446 aaKnown RBP11.77□□□□□ -0.53
Trim60-201ENSMUST00000048565 Fmn1Q05860 1466 aa11.75□□□□□ -0.53
Trim60-201ENSMUST00000048565 Top2aQ01320 1528 aaKnown RBP11.72□□□□□ -0.53
Trim60-201ENSMUST00000048565 Wdr62Q3U3T8 1523 aa11.69□□□□□ -0.54
Trim60-201ENSMUST00000048565 TnnQ80Z71 1560 aa11.68□□□□□ -0.54
Trim60-201ENSMUST00000048565 Frmpd1A2AKB4 1549 aa11.66□□□□□ -0.54
Trim60-201ENSMUST00000048565 Rapgef2Q8CHG7 1496 aa11.64□□□□□ -0.55
Trim60-201ENSMUST00000048565 Unc13aQ4KUS2 1712 aa11.61□□□□□ -0.55
Trim60-201ENSMUST00000048565 Ercc6F8VPZ5 1481 aa11.58□□□□□ -0.56
Trim60-201ENSMUST00000048565 Lamc3Q9R0B6 1581 aa11.56□□□□□ -0.56
Trim60-201ENSMUST00000048565 Eif4g1Q6NZJ6 1600 aaKnown RBP11.54□□□□□ -0.56
Trim60-201ENSMUST00000048565 Thoc2B1AZI6 1594 aaKnown RBP11.51□□□□□ -0.57
Trim60-201ENSMUST00000048565 Cep162Q6ZQ06 1403 aa11.51□□□□□ -0.57
Trim60-201ENSMUST00000048565 Camsap1A2AHC3 1581 aa11.46□□□□□ -0.57
Trim60-201ENSMUST00000048565 Kif15Q6P9L6 1387 aa11.44□□□□□ -0.58
Trim60-201ENSMUST00000048565 PtprkP35822 1457 aa11.41□□□□□ -0.58
Trim60-201ENSMUST00000048565 NrkQ9R0G8 1455 aa11.4□□□□□ -0.58
Trim60-201ENSMUST00000048565 Ppargc1bQ8VHJ7 1014 aa11.4□□□□□ -0.59
Trim60-201ENSMUST00000048565 Arhgap35Q91YM2 1499 aa11.39□□□□□ -0.59
Trim60-201ENSMUST00000048565 Shroom4Q1W617 1475 aa11.37□□□□□ -0.59
Trim60-201ENSMUST00000048565 Fam135aQ6NS59 1506 aa11.37□□□□□ -0.59
Trim60-201ENSMUST00000048565 Npm2Q80W85 207 aa11.36□□□□□ -0.59
Trim60-201ENSMUST00000048565 Phldb1Q6PDH0 1371 aaKnown RBP11.35□□□□□ -0.59
Trim60-201ENSMUST00000048565 Myt1lP97500 1187 aa11.34□□□□□ -0.59
Trim60-201ENSMUST00000048565 Grin2bQ01097 1482 aa11.34□□□□□ -0.59
Trim60-201ENSMUST00000048565 Ccdc18Q640L5 1455 aa11.33□□□□□ -0.6
Trim60-201ENSMUST00000048565 Mier1Q5UAK0 511 aa11.32□□□□□ -0.6
Trim60-201ENSMUST00000048565 Map3k1P53349 1493 aa11.31□□□□□ -0.6
Trim60-201ENSMUST00000048565 Il27Q8K3I6 234 aa11.3□□□□□ -0.6
Trim60-201ENSMUST00000048565 Cux2P70298 1426 aa11.28□□□□□ -0.6
Trim60-201ENSMUST00000048565 Clip1Q922J3 1391 aa11.27□□□□□ -0.61
Trim60-201ENSMUST00000048565 Arap1Q4LDD4 1452 aa11.25□□□□□ -0.61
Trim60-201ENSMUST00000048565 Mroh2bQ7M6Y6 1581 aa11.24□□□□□ -0.61
Trim60-201ENSMUST00000048565 UbtfP25976 765 aaKnown RBP11.22□□□□□ -0.61
Trim60-201ENSMUST00000048565 Erich3F6QRE9 1637 aa11.22□□□□□ -0.61
Trim60-201ENSMUST00000048565 AqrQ8CFQ3 1481 aaKnown RBP11.21□□□□□ -0.61
Trim60-201ENSMUST00000048565 Baz1bQ9Z277 1479 aa11.21□□□□□ -0.61
Trim60-201ENSMUST00000048565 NefmP08553 848 aa11.21□□□□□ -0.62
Trim60-201ENSMUST00000048565 Ubl4bQ9CQ84 188 aa11.21□□□□□ -0.62
Trim60-201ENSMUST00000048565 Arhgef5E9Q7D5 1581 aa11.2□□□□□ -0.62
Trim60-201ENSMUST00000048565 Ankrd26Q811D2 1581 aa11.2□□□□□ -0.62
Trim60-201ENSMUST00000048565 Eea1Q8BL66 1411 aa11.19□□□□□ -0.62
Trim60-201ENSMUST00000048565 Pcgf6Q99NA9 353 aa11.19□□□□□ -0.62
Trim60-201ENSMUST00000048565 PogzQ8BZH4 1409 aaKnown RBP11.19□□□□□ -0.62
Trim60-201ENSMUST00000048565 Plekhg3Q4VAC9 1341 aa11.17□□□□□ -0.62
Trim60-201ENSMUST00000048565 Dmrt2Q8BG36 561 aa11.17□□□□□ -0.62
Trim60-201ENSMUST00000048565 LrpprcQ6PB66 1392 aaKnown RBP11.17□□□□□ -0.62
Trim60-201ENSMUST00000048565 Duox2A2AQ99 1517 aa11.16□□□□□ -0.62
Trim60-201ENSMUST00000048565 Efcab5A0JP43 1406 aa11.16□□□□□ -0.62
Trim60-201ENSMUST00000048565 Samd9lQ69Z37 1561 aa11.15□□□□□ -0.62
Trim60-201ENSMUST00000048565 Ncapd3Q6ZQK0 1506 aa11.15□□□□□ -0.62
Trim60-201ENSMUST00000048565 Pcf11G3X9Z4 1553 aa11.14□□□□□ -0.63
Trim60-201ENSMUST00000048565 Tiam1Q60610 1591 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 92.7 ms