RNA–Protein interactions for RNA: ENSMUST00000033776.14

Dkc1-201, Transcript of H/ACA ribonucleoprotein complex subunit 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Dkc1, Length 2,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Dkc1-201ENSMUST00000033776 Gm35339A0A140LHH9 1649 aa17.74■□□□□ 0.43
Dkc1-201ENSMUST00000033776 NischQ80TM9 1593 aa17.45■□□□□ 0.38
Dkc1-201ENSMUST00000033776 Abcc9P70170 1546 aa17.11■□□□□ 0.33
Dkc1-201ENSMUST00000033776 Abcc8B2RUS7 1588 aa16.73■□□□□ 0.27
Dkc1-201ENSMUST00000033776 Rtl1Q7M732 1744 aa15.94■□□□□ 0.14
Dkc1-201ENSMUST00000033776 Dcaf1Q80TR8 1506 aa15.84■□□□□ 0.13
Dkc1-201ENSMUST00000033776 ScribQ80U72 1612 aa15.71■□□□□ 0.11
Dkc1-201ENSMUST00000033776 Ccdc180J3QNE4 1664 aa15.68■□□□□ 0.1
Dkc1-201ENSMUST00000033776 Rb1cc1Q9ESK9 1588 aa15.29■□□□□ 0.04
Dkc1-201ENSMUST00000033776 Kdm5dQ62240 1548 aa15.28■□□□□ 0.04
Dkc1-201ENSMUST00000033776 NacadQ5SWP3 1504 aa15.24■□□□□ 0.03
Dkc1-201ENSMUST00000033776 Rhox8Q6VSS7 320 aa15.21■□□□□ 0.03
Dkc1-201ENSMUST00000033776 Baz1aO88379 1555 aa15.19■□□□□ 0.02
Dkc1-201ENSMUST00000033776 Zcchc6Q5BLK4 1491 aaKnown RBP15.18■□□□□ 0.02
Dkc1-201ENSMUST00000033776 Crybg2B7ZCC2 1516 aa15.16■□□□□ 0.02
Dkc1-201ENSMUST00000033776 Sycp2Q9CUU3 1500 aa14.92□□□□□ -0.02
Dkc1-201ENSMUST00000033776 Smarca2Q6DIC0 1577 aa14.88□□□□□ -0.03
Dkc1-201ENSMUST00000033776 BicraF8VPZ9 1578 aa14.61□□□□□ -0.07
Dkc1-201ENSMUST00000033776 HrcG5E8J6 738 aa14.43□□□□□ -0.1
Dkc1-201ENSMUST00000033776 Brd4Q9ESU6 1400 aaKnown RBP14.31□□□□□ -0.12
Dkc1-201ENSMUST00000033776 Cttnbp2B9EJA2 1648 aa14.28□□□□□ -0.12
Dkc1-201ENSMUST00000033776 Cecr2E9Q2Z1 1453 aa14.26□□□□□ -0.13
Dkc1-201ENSMUST00000033776 Smarca4Q3TKT4 1613 aaKnown RBP14.24□□□□□ -0.13
Dkc1-201ENSMUST00000033776 Synj1Q8CHC4 1574 aa14.24□□□□□ -0.13
Dkc1-201ENSMUST00000033776 Top2bQ64511 1612 aa14.21□□□□□ -0.13
Dkc1-201ENSMUST00000033776 Trim41Q5NCC3 630 aa14.19□□□□□ -0.14
Dkc1-201ENSMUST00000033776 CftrP26361 1476 aa14.17□□□□□ -0.14
Dkc1-201ENSMUST00000033776 Cep164Q5DU05 1446 aa14.13□□□□□ -0.15
Dkc1-201ENSMUST00000033776 Ccdc136Q3TVA9 1136 aa14.11□□□□□ -0.15
Dkc1-201ENSMUST00000033776 Golga3P55937 1487 aa14.1□□□□□ -0.15
Dkc1-201ENSMUST00000033776 Iqgap2Q3UQ44 1575 aa14.01□□□□□ -0.17
Dkc1-201ENSMUST00000033776 Atad2bE9Q166 1460 aaKnown RBP13.98□□□□□ -0.17
Dkc1-201ENSMUST00000033776 Pds5bQ4VA53 1446 aaKnown RBP13.92□□□□□ -0.18
Dkc1-201ENSMUST00000033776 Rsf1E9PWW9 1441 aaKnown RBP13.89□□□□□ -0.19
Dkc1-201ENSMUST00000033776 TnnQ80Z71 1560 aa13.89□□□□□ -0.19
Dkc1-201ENSMUST00000033776 Cc2d2aQ8CFW7 1633 aa13.89□□□□□ -0.19
Dkc1-201ENSMUST00000033776 Fmn1Q05860 1466 aa13.83□□□□□ -0.2
Dkc1-201ENSMUST00000033776 Rpgrip1Q9EPQ2 1331 aa13.82□□□□□ -0.2
Dkc1-201ENSMUST00000033776 Ccdc88bQ4QRL3 1481 aa13.82□□□□□ -0.2
Dkc1-201ENSMUST00000033776 Wdr62Q3U3T8 1523 aa13.81□□□□□ -0.2
Dkc1-201ENSMUST00000033776 Top2aQ01320 1528 aaKnown RBP13.8□□□□□ -0.2
Dkc1-201ENSMUST00000033776 Unc13aQ4KUS2 1712 aa13.79□□□□□ -0.2
Dkc1-201ENSMUST00000033776 Lamc3Q9R0B6 1581 aa13.71□□□□□ -0.21
Dkc1-201ENSMUST00000033776 Frmpd1A2AKB4 1549 aa13.7□□□□□ -0.22
Dkc1-201ENSMUST00000033776 Eif4g1Q6NZJ6 1600 aaKnown RBP13.7□□□□□ -0.22
Dkc1-201ENSMUST00000033776 Thoc2B1AZI6 1594 aaKnown RBP13.69□□□□□ -0.22
Dkc1-201ENSMUST00000033776 Rapgef2Q8CHG7 1496 aa13.66□□□□□ -0.22
Dkc1-201ENSMUST00000033776 Chic1Q8CBW7 227 aa13.63□□□□□ -0.23
Dkc1-201ENSMUST00000033776 Acin1Q9JIX8 1338 aaKnown RBP13.59□□□□□ -0.23
Dkc1-201ENSMUST00000033776 Ercc6F8VPZ5 1481 aa13.59□□□□□ -0.23
Dkc1-201ENSMUST00000033776 Baz1bQ9Z277 1479 aa13.56□□□□□ -0.24
Dkc1-201ENSMUST00000033776 Cngb1E1AZ71 1325 aa13.56□□□□□ -0.24
Dkc1-201ENSMUST00000033776 Fam135aQ6NS59 1506 aa13.53□□□□□ -0.24
Dkc1-201ENSMUST00000033776 Camsap1A2AHC3 1581 aa13.49□□□□□ -0.25
Dkc1-201ENSMUST00000033776 Esf1Q3V1V3 845 aaKnown RBP13.47□□□□□ -0.25
Dkc1-201ENSMUST00000033776 NrkQ9R0G8 1455 aa13.46□□□□□ -0.25
Dkc1-201ENSMUST00000033776 Cep162Q6ZQ06 1403 aa13.41□□□□□ -0.26
Dkc1-201ENSMUST00000033776 Map3k1P53349 1493 aa13.4□□□□□ -0.26
Dkc1-201ENSMUST00000033776 Phldb1Q6PDH0 1371 aaKnown RBP13.37□□□□□ -0.27
Dkc1-201ENSMUST00000033776 Shroom4Q1W617 1475 aa13.35□□□□□ -0.27
Dkc1-201ENSMUST00000033776 Grin2bQ01097 1482 aa13.32□□□□□ -0.28
Dkc1-201ENSMUST00000033776 AqrQ8CFQ3 1481 aaKnown RBP13.32□□□□□ -0.28
Dkc1-201ENSMUST00000033776 Erich3F6QRE9 1637 aa13.31□□□□□ -0.28
Dkc1-201ENSMUST00000033776 Arhgap35Q91YM2 1499 aa13.3□□□□□ -0.28
Dkc1-201ENSMUST00000033776 Gpatch8A2A6A1 1505 aa13.28□□□□□ -0.28
Dkc1-201ENSMUST00000033776 Ccdc18Q640L5 1455 aa13.27□□□□□ -0.29
Dkc1-201ENSMUST00000033776 Kif15Q6P9L6 1387 aa13.25□□□□□ -0.29
Dkc1-201ENSMUST00000033776 PtprkP35822 1457 aa13.23□□□□□ -0.29
Dkc1-201ENSMUST00000033776 Mroh2bQ7M6Y6 1581 aa13.2□□□□□ -0.3
Dkc1-201ENSMUST00000033776 Gab3Q8BSM5 595 aa13.17□□□□□ -0.3
Dkc1-201ENSMUST00000033776 Efcab5A0JP43 1406 aa13.17□□□□□ -0.3
Dkc1-201ENSMUST00000033776 Lmo7E9PYF4 1699 aaKnown RBP13.15□□□□□ -0.3
Dkc1-201ENSMUST00000033776 Peg3Q3URU2 1571 aa13.14□□□□□ -0.31
Dkc1-201ENSMUST00000033776 PogzQ8BZH4 1409 aaKnown RBP13.13□□□□□ -0.31
Dkc1-201ENSMUST00000033776 Arhgef5E9Q7D5 1581 aa13.13□□□□□ -0.31
Dkc1-201ENSMUST00000033776 Cux2P70298 1426 aa13.12□□□□□ -0.31
Dkc1-201ENSMUST00000033776 Ankrd26Q811D2 1581 aa13.12□□□□□ -0.31
Dkc1-201ENSMUST00000033776 TchhA0A0B4J1F9 1599 aa13.08□□□□□ -0.32
Dkc1-201ENSMUST00000033776 SynmQ70IV5 1561 aa13.08□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Kif21aQ9QXL2 1672 aa13.08□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Arap1Q4LDD4 1452 aa13.07□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Polr1aO35134 1717 aaKnown RBP13.07□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Tiam1Q60610 1591 aa13.07□□□□□ -0.32
Dkc1-201ENSMUST00000033776 LrpprcQ6PB66 1392 aaKnown RBP13.06□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Duox2A2AQ99 1517 aa13.06□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Samd9lQ69Z37 1561 aa13.05□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Ehmt2Q9Z148 1263 aaKnown RBP13.05□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Eea1Q8BL66 1411 aa13.05□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Pbrm1Q8BSQ9 1634 aaKnown RBP13.04□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Crocc2F6XLV1 1638 aa13.04□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Mrc2Q64449 1479 aa13.02□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Ncapd3Q6ZQK0 1506 aa13.02□□□□□ -0.32
Dkc1-201ENSMUST00000033776 Clip1Q922J3 1391 aa13.02□□□□□ -0.33
Dkc1-201ENSMUST00000033776 Pcf11G3X9Z4 1553 aa13□□□□□ -0.33
Dkc1-201ENSMUST00000033776 Carmil1Q6EDY6 1374 aa13□□□□□ -0.33
Dkc1-201ENSMUST00000033776 Urb2E9Q7L1 1524 aaKnown RBP13□□□□□ -0.33
Dkc1-201ENSMUST00000033776 Rpap1Q80TE0 1409 aa12.99□□□□□ -0.33
Dkc1-201ENSMUST00000033776 EprsQ8CGC7 1512 aaKnown RBP12.98□□□□□ -0.33
Dkc1-201ENSMUST00000033776 NefmP08553 848 aa12.98□□□□□ -0.33
Dkc1-201ENSMUST00000033776 Kdm5bQ80Y84 1544 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms