RNA–Protein interactions for RNA: ENSMUST00000031327.8

Cxcl1-201, Transcript of Growth-regulated alpha protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cxcl1, Length 953 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1-201ENSMUST00000031327 Gm35339A0A140LHH9 1649 aa25.53■■□□□ 1.68
Cxcl1-201ENSMUST00000031327 NischQ80TM9 1593 aa25■■□□□ 1.59
Cxcl1-201ENSMUST00000031327 Abcc9P70170 1546 aa24.46■■□□□ 1.51
Cxcl1-201ENSMUST00000031327 Abcc8B2RUS7 1588 aa24.33■■□□□ 1.49
Cxcl1-201ENSMUST00000031327 ScribQ80U72 1612 aa23.82■■□□□ 1.4
Cxcl1-201ENSMUST00000031327 NacadQ5SWP3 1504 aa22.97■■□□□ 1.27
Cxcl1-201ENSMUST00000031327 Kdm5dQ62240 1548 aa22.89■■□□□ 1.26
Cxcl1-201ENSMUST00000031327 Dnajc5bQ9CQ94 199 aa22.64■■□□□ 1.21
Cxcl1-201ENSMUST00000031327 Sycp2Q9CUU3 1500 aa22.55■■□□□ 1.2
Cxcl1-201ENSMUST00000031327 BicraF8VPZ9 1578 aa22.35■■□□□ 1.17
Cxcl1-201ENSMUST00000031327 Dcaf1Q80TR8 1506 aa22.25■■□□□ 1.15
Cxcl1-201ENSMUST00000031327 Thoc2B1AZI6 1594 aaKnown RBP21.87■■□□□ 1.09
Cxcl1-201ENSMUST00000031327 Pds5bQ4VA53 1446 aaKnown RBP21.82■■□□□ 1.08
Cxcl1-201ENSMUST00000031327 Rb1cc1Q9ESK9 1588 aa21.74■■□□□ 1.07
Cxcl1-201ENSMUST00000031327 Cc2d2aQ8CFW7 1633 aa21.5■■□□□ 1.03
Cxcl1-201ENSMUST00000031327 Atad2bE9Q166 1460 aaKnown RBP21.5■■□□□ 1.03
Cxcl1-201ENSMUST00000031327 Mapk8ip2Q9ERE9 830 aa21.41■■□□□ 1.02
Cxcl1-201ENSMUST00000031327 Baz1aO88379 1555 aa21.38■■□□□ 1.01
Cxcl1-201ENSMUST00000031327 Crybg2B7ZCC2 1516 aa21.35■■□□□ 1.01
Cxcl1-201ENSMUST00000031327 Ercc6F8VPZ5 1481 aa21.34■■□□□ 1.01
Cxcl1-201ENSMUST00000031327 Fam135aQ6NS59 1506 aa21.24■□□□□ 0.99
Cxcl1-201ENSMUST00000031327 Ccdc180J3QNE4 1664 aa21.21■□□□□ 0.99
Cxcl1-201ENSMUST00000031327 Zcchc6Q5BLK4 1491 aaKnown RBP21.2■□□□□ 0.98
Cxcl1-201ENSMUST00000031327 Smarca2Q6DIC0 1577 aa21.19■□□□□ 0.98
Cxcl1-201ENSMUST00000031327 Smarca4Q3TKT4 1613 aaKnown RBP21.09■□□□□ 0.97
Cxcl1-201ENSMUST00000031327 Rhox8Q6VSS7 320 aa21.09■□□□□ 0.97
Cxcl1-201ENSMUST00000031327 Iqgap2Q3UQ44 1575 aa21.07■□□□□ 0.96
Cxcl1-201ENSMUST00000031327 Dnajc5P60904 198 aa21.01■□□□□ 0.95
Cxcl1-201ENSMUST00000031327 Wdr62Q3U3T8 1523 aa20.99■□□□□ 0.95
Cxcl1-201ENSMUST00000031327 Phldb1Q6PDH0 1371 aaKnown RBP20.97■□□□□ 0.95
Cxcl1-201ENSMUST00000031327 Frmpd1A2AKB4 1549 aa20.97■□□□□ 0.95
Cxcl1-201ENSMUST00000031327 Cecr2E9Q2Z1 1453 aa20.92■□□□□ 0.94
Cxcl1-201ENSMUST00000031327 Baz1bQ9Z277 1479 aa20.92■□□□□ 0.94
Cxcl1-201ENSMUST00000031327 Ubl4bQ9CQ84 188 aa20.84■□□□□ 0.93
Cxcl1-201ENSMUST00000031327 Trim41Q5NCC3 630 aa20.78■□□□□ 0.92
Cxcl1-201ENSMUST00000031327 Mrc2Q64449 1479 aa20.75■□□□□ 0.91
Cxcl1-201ENSMUST00000031327 Unc13aQ4KUS2 1712 aa20.64■□□□□ 0.89
Cxcl1-201ENSMUST00000031327 Lrriq1Q0P5X1 1673 aa20.34■□□□□ 0.85
Cxcl1-201ENSMUST00000031327 CftrP26361 1476 aa20.31■□□□□ 0.84
Cxcl1-201ENSMUST00000031327 Cttnbp2B9EJA2 1648 aa20.27■□□□□ 0.84
Cxcl1-201ENSMUST00000031327 Rsf1E9PWW9 1441 aaKnown RBP20.27■□□□□ 0.83
Cxcl1-201ENSMUST00000031327 Synj1Q8CHC4 1574 aa20.21■□□□□ 0.83
Cxcl1-201ENSMUST00000031327 Cux2P70298 1426 aa20.16■□□□□ 0.82
Cxcl1-201ENSMUST00000031327 Shroom2A2ALU4 1481 aa20.12■□□□□ 0.81
Cxcl1-201ENSMUST00000031327 Kif21aQ9QXL2 1672 aa20.12■□□□□ 0.81
Cxcl1-201ENSMUST00000031327 Brd4Q9ESU6 1400 aaKnown RBP20.08■□□□□ 0.8
Cxcl1-201ENSMUST00000031327 Kif15Q6P9L6 1387 aa20.05■□□□□ 0.8
Cxcl1-201ENSMUST00000031327 Eif4g3Q80XI3 1579 aaKnown RBP20.04■□□□□ 0.8
Cxcl1-201ENSMUST00000031327 Col17a1Q07563 1470 aa19.98■□□□□ 0.79
Cxcl1-201ENSMUST00000031327 Esf1Q3V1V3 845 aaKnown RBP19.94■□□□□ 0.78
Cxcl1-201ENSMUST00000031327 Npm1Q61937 292 aaKnown RBP19.9■□□□□ 0.78
Cxcl1-201ENSMUST00000031327 Ccdc136Q3TVA9 1136 aa19.85■□□□□ 0.77
Cxcl1-201ENSMUST00000031327 Pabpn1Q8CCS6 302 aaKnown RBP19.84■□□□□ 0.77
Cxcl1-201ENSMUST00000031327 Lamc3Q9R0B6 1581 aa19.83■□□□□ 0.77
Cxcl1-201ENSMUST00000031327 Rtl1Q7M732 1744 aa19.82■□□□□ 0.76
Cxcl1-201ENSMUST00000031327 Urb2E9Q7L1 1524 aaKnown RBP19.8■□□□□ 0.76
Cxcl1-201ENSMUST00000031327 Top2bQ64511 1612 aa19.79■□□□□ 0.76
Cxcl1-201ENSMUST00000031327 Cep164Q5DU05 1446 aa19.77■□□□□ 0.76
Cxcl1-201ENSMUST00000031327 Chic1Q8CBW7 227 aa19.75■□□□□ 0.75
Cxcl1-201ENSMUST00000031327 Plb1Q3TTY0 1478 aa19.74■□□□□ 0.75
Cxcl1-201ENSMUST00000031327 Dhx29Q6PGC1 1365 aaKnown RBP19.7■□□□□ 0.74
Cxcl1-201ENSMUST00000031327 Pelp1Q9DBD5 1123 aaKnown RBP19.68■□□□□ 0.74
Cxcl1-201ENSMUST00000031327 Il27Q8K3I6 234 aa19.6■□□□□ 0.73
Cxcl1-201ENSMUST00000031327 Zcchc11B2RX14 1644 aaKnown RBP19.59■□□□□ 0.73
Cxcl1-201ENSMUST00000031327 Crocc2F6XLV1 1638 aa19.57■□□□□ 0.72
Cxcl1-201ENSMUST00000031327 Rusc2Q80U22 1514 aa19.56■□□□□ 0.72
Cxcl1-201ENSMUST00000031327 LrpprcQ6PB66 1392 aaKnown RBP19.56■□□□□ 0.72
Cxcl1-201ENSMUST00000031327 Ccdc18Q640L5 1455 aa19.54■□□□□ 0.72
Cxcl1-201ENSMUST00000031327 Ift140E9PY46 1464 aa19.5■□□□□ 0.71
Cxcl1-201ENSMUST00000031327 Pcdh10E9PXQ7 1057 aa19.48■□□□□ 0.71
Cxcl1-201ENSMUST00000031327 TnnQ80Z71 1560 aa19.43■□□□□ 0.7
Cxcl1-201ENSMUST00000031327 Camsap1A2AHC3 1581 aa19.42■□□□□ 0.7
Cxcl1-201ENSMUST00000031327 PogzQ8BZH4 1409 aaKnown RBP19.39■□□□□ 0.69
Cxcl1-201ENSMUST00000031327 Arhgef5E9Q7D5 1581 aa19.36■□□□□ 0.69
Cxcl1-201ENSMUST00000031327 Adgrl3Q80TS3 1537 aa19.33■□□□□ 0.68
Cxcl1-201ENSMUST00000031327 Disp1Q3TDN0 1521 aa19.3■□□□□ 0.68
Cxcl1-201ENSMUST00000031327 Ttbk1Q6PCN3 1308 aa19.29■□□□□ 0.68
Cxcl1-201ENSMUST00000031327 Duox2A2AQ99 1517 aa19.29■□□□□ 0.68
Cxcl1-201ENSMUST00000031327 PtprkP35822 1457 aa19.23■□□□□ 0.67
Cxcl1-201ENSMUST00000031327 Golga3P55937 1487 aa19.23■□□□□ 0.67
Cxcl1-201ENSMUST00000031327 Cc2d2bA0A286YDU8 1405 aa19.22■□□□□ 0.67
Cxcl1-201ENSMUST00000031327 Nup160Q9Z0W3 1402 aaKnown RBP19.22■□□□□ 0.67
Cxcl1-201ENSMUST00000031327 Cep170Q6A065 1588 aa19.2■□□□□ 0.66
Cxcl1-201ENSMUST00000031327 Gm156Q58A37 223 aa19.2■□□□□ 0.66
Cxcl1-201ENSMUST00000031327 PtprtQ99M80 1454 aa19.18■□□□□ 0.66
Cxcl1-201ENSMUST00000031327 Setd1bQ8CFT2 1985 aa19.17■□□□□ 0.66
Cxcl1-201ENSMUST00000031327 Gapvd1Q6PAR5 1458 aa19.17■□□□□ 0.66
Cxcl1-201ENSMUST00000031327 Cngb1E1AZ71 1325 aa19.15■□□□□ 0.66
Cxcl1-201ENSMUST00000031327 Pbrm1Q8BSQ9 1634 aaKnown RBP19.14■□□□□ 0.66
Cxcl1-201ENSMUST00000031327 Samd9lQ69Z37 1561 aa19.14■□□□□ 0.65
Cxcl1-201ENSMUST00000031327 Fgd6Q69ZL1 1399 aa19.12■□□□□ 0.65
Cxcl1-201ENSMUST00000031327 Grin2bQ01097 1482 aa19.1■□□□□ 0.65
Cxcl1-201ENSMUST00000031327 Fmn1Q05860 1466 aa19.07■□□□□ 0.64
Cxcl1-201ENSMUST00000031327 AqrQ8CFQ3 1481 aaKnown RBP19.05■□□□□ 0.64
Cxcl1-201ENSMUST00000031327 Rad54l2Q99NG0 1466 aa19.03■□□□□ 0.64
Cxcl1-201ENSMUST00000031327 Grin2aP35436 1464 aa19.01■□□□□ 0.63
Cxcl1-201ENSMUST00000031327 Efcab5A0JP43 1406 aa19■□□□□ 0.63
Cxcl1-201ENSMUST00000031327 Pprc1Q6NZN1 1644 aa19■□□□□ 0.63
Cxcl1-201ENSMUST00000031327 AknaQ80VW7 1404 aa19■□□□□ 0.63
Cxcl1-201ENSMUST00000031327 Magi3Q9EQJ9 1476 aa18.98■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 87.1 ms