RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TERF1P54274 439 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 EIF3BP55884 814 aaKnown RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 RPS18P62269 152 aaKnown RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 PRAMEF17Q5VTA0 474 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 CASC4Q6P4E1 433 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 ZNF517Q6ZMY9 492 aaPredicted RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 KRT222Q8N1A0 295 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 PRELID2Q8N945 189 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 SLC38A9Q8NBW4 561 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 MAGOHBQ96A72 148 aaKnown RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 RUFY1Q96T51 708 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 TCF12Q99081 682 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 KIFC1Q9BW19 673 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 CHRNA10Q9GZZ6 450 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 INTS7Q9NVH2 962 aaKnown RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 SYBUQ9NX95 663 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 SPHK1Q9NYA1 384 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 MARCH4Q9P2E8 410 aaPredicted RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 SOX13Q9UN79 622 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 PADI2Q9Y2J8 665 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 CFAP46Q8IYW2 2715 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.3■□□□□ 0.52
CLN6-221ENST00000637494 H3BMM5 538 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 PYCARD-AS1I3L0S3 204 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 SLCO2B1O94956 709 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 CD63P08962 238 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 RORAP35398 523 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 KYNUQ16719 465 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 TCTN3Q6NUS6 607 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 TMEM135Q86UB9 458 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 APLFQ8IW19 511 aaPredicted RBP18.3■□□□□ 0.52
CLN6-221ENST00000637494 ENDOVQ8N8Q3 282 aaKnown RBP18.3■□□□□ 0.52
CLN6-221ENST00000637494 LKAAEAR1Q8TD35 194 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 MAGEC3Q8TD91 643 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 P2RY12Q9H244 342 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 ACSS2Q9NR19 701 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 TXLNGQ9NUQ3 528 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 PCMTD2Q9NV79 361 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 GPN3Q9UHW5 284 aaPredicted RBP18.3■□□□□ 0.52
CLN6-221ENST00000637494 G3BP2Q9UN86 482 aaKnown RBP18.3■□□□□ 0.52
CLN6-221ENST00000637494 CDYLQ9Y232 598 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 TP53TG5Q9Y2B4 290 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 VPS9D1Q9Y2B5 631 aa18.3■□□□□ 0.52
CLN6-221ENST00000637494 ZSCAN12O43309 604 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 S1PR4O95977 384 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 CD9P21926 228 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 CASRP41180 1078 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 TLE1Q04724 770 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 KLRB1Q12918 225 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 ZNF789Q5FWF6 425 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 TLDC1Q6P9B6 456 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 VRK3Q8IV63 474 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 RASGEF1CQ8N431 466 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 RAD51AP1Q96B01 352 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 MFSD3Q96ES6 412 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 TLK1Q9UKI8 766 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 TCFL5Q9UL49 500 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 SRPK3Q9UPE1 567 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 PLCL2Q9UPR0 1127 aa18.29■□□□□ 0.52
CLN6-221ENST00000637494 GOLGA6L10A0A0M3HER8 536 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 MAGEB16A2A368 324 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 PGRMC1O00264 195 aaKnown RBP18.28■□□□□ 0.52
CLN6-221ENST00000637494 RASGRF2O14827 1237 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 TPBGLP0DKB5 382 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 CCNFP41002 786 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 KCNJ11Q14654 390 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 DEFB110Q30KQ9 67 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 PTCHD3Q3KNS1 767 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 KIAA0930Q6ICG6 404 aaPredicted RBP18.28■□□□□ 0.52
CLN6-221ENST00000637494 CCDC137Q6PK04 289 aaKnown RBP18.28■□□□□ 0.52
CLN6-221ENST00000637494 CES3Q6UWW8 571 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 ASB18Q6ZVZ8 466 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 RAB43Q86YS6 212 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 TEX19Q8NA77 164 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 OR2L8Q8NGY9 312 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 DENND1AQ8TEH3 1009 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 GRK7Q8WTQ7 553 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 NDC1Q9BTX1 674 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 DHRS4Q9BTZ2 278 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 XAB2Q9HCS7 855 aaKnown RBP18.28■□□□□ 0.52
CLN6-221ENST00000637494 FAM60AQ9NP50 221 aa18.28■□□□□ 0.52
CLN6-221ENST00000637494 TCRBV7S3A2A0A539 114 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 ARGFXA6NJG6 315 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 E5RI56 91 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 ZSCAN9O15535 394 aaPredicted RBP18.27■□□□□ 0.52
CLN6-221ENST00000637494 FKBP9O95302 570 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 ESR1P03372 595 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 MLNP12872 115 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 CHRM3P20309 590 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 OGNP20774 298 aaKnown RBP18.27■□□□□ 0.52
CLN6-221ENST00000637494 FMO4P31512 558 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 COILP38432 576 aaPredicted RBP18.27■□□□□ 0.52
CLN6-221ENST00000637494 MAGEA6P43360 314 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 IL10RAQ13651 578 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 THOC5Q13769 683 aaKnown RBP18.27■□□□□ 0.52
CLN6-221ENST00000637494 NCF4Q15080 339 aa18.27■□□□□ 0.52
CLN6-221ENST00000637494 SF1Q15637 639 aaKnown RBP18.27■□□□□ 0.52
CLN6-221ENST00000637494 ZC3H12BQ5HYM0 836 aaKnown RBP18.27■□□□□ 0.52
CLN6-221ENST00000637494 RHBDD2Q6NTF9 364 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms