RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 IL27RAQ6UWB1 636 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 RNF165Q6ZSG1 346 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 LYSMD3Q7Z3D4 306 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 RIMKLAQ8IXN7 391 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 ZNF786Q8N393 782 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 RPL10LQ96L21 214 aaKnown RBP17.07■□□□□ 0.32
FAM3A-222ENST00000621967 C19orf43Q9BQ61 176 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 FEM1AQ9BSK4 669 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 CCL27Q9Y4X3 112 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 C19orf67A6NJJ6 358 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 FFAR2O15552 330 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 OTCP00480 354 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 G6PDP11413 515 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 CDK4P11802 303 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 CDH1P12830 882 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 RPL10P27635 214 aaKnown RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 RPS9P46781 194 aaKnown RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 RHOAP61586 193 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 KIAA0040Q15053 153 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 PLEKHG6Q3KR16 790 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 ASTLQ6HA08 431 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 USP51Q70EK9 711 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 PATL1Q86TB9 770 aaKnown RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 PIH1D2Q8WWB5 315 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 C2orf49Q9BVC5 232 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 GPR63Q9BZJ6 419 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 SLC2A4RGQ9NR83 387 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 FBXO10Q9UK96 956 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 DUSP12Q9UNI6 340 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 FADS3Q9Y5Q0 445 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 PIAS3Q9Y6X2 628 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 TCF20Q9UGU0 1960 aaKnown RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 ZNF701M0R085 212 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 RAD51BO15315 384 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 PRSS23O95084 383 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 PGLSO95336 258 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 S100BP04271 92 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 MSH3P20585 1137 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 EIF2DP41214 584 aaKnown RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 SLC6A11P48066 632 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 CRY1Q16526 586 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 PYCR3Q53H96 274 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 DHRSXQ8N5I4 330 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 CCDC97Q96F63 343 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 MYO19Q96H55 970 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 FBXL20Q96IG2 436 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 NSMCE2Q96MF7 247 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 CGREF1Q99674 301 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 C8orf33Q9H7E9 229 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-222ENST00000621967 OARD1Q9Y530 152 aa17.06■□□□□ 0.32
FAM3A-222ENST00000621967 CLOCKO15516 846 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 ZNF7P17097 686 aaPredicted RBP17.05■□□□□ 0.32
FAM3A-222ENST00000621967 VARSP26640 1264 aaKnown RBP17.05■□□□□ 0.32
FAM3A-222ENST00000621967 CTHP32929 405 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 OPRD1P41143 372 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 AP1S1P61966 158 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 ADARB1P78563 741 aaKnown RBP17.05■□□□□ 0.32
FAM3A-222ENST00000621967 PWP1Q13610 501 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 SELPLGQ14242 412 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 ABRAXAS2Q15018 415 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 NR6A1Q15406 480 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 SMU1Q2TAY7 513 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 AP5B1Q2VPB7 878 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 ZBED5Q49AG3 693 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 GLYATQ6IB77 296 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 ABRAXAS1Q6UWZ7 409 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 SERPINA9Q86WD7 417 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 GALNT13Q8IUC8 556 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 APCDD1Q8J025 514 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 DTWD1Q8N5C7 304 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 DCAF4L2Q8NA75 395 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 OR8J3Q8NGG0 315 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 CYGBQ8WWM9 190 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 ALG14Q96F25 216 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 CHID1Q9BWS9 393 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 CIPCQ9C0C6 399 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 CLPBQ9H078 707 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 IPPKQ9H8X2 491 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 VPS51Q9UID3 782 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 GNPTGQ9UJJ9 305 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 SLC27A6Q9Y2P4 619 aa17.05■□□□□ 0.32
FAM3A-222ENST00000621967 FCF1Q9Y324 198 aaKnown RBP17.05■□□□□ 0.32
FAM3A-222ENST00000621967 POLR3HQ9Y535 204 aaPredicted RBP17.05■□□□□ 0.32
FAM3A-222ENST00000621967 KIAA1549LQ6ZVL6 1849 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 TRBV5-4A0A0C4DH59 114 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 KLHL33A6NCF5 533 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 TAPBPO15533 448 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 RSL1D1O76021 490 aaKnown RBP17.04■□□□□ 0.32
FAM3A-222ENST00000621967 ALPIP09923 528 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 CISD3P0C7P0 127 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 DMC1Q14565 340 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 RFTN2Q52LD8 501 aaPredicted RBP17.04■□□□□ 0.32
FAM3A-222ENST00000621967 ATXN7L2Q5T6C5 722 aaPredicted RBP17.04■□□□□ 0.32
FAM3A-222ENST00000621967 ARMC12Q5T9G4 340 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 PTRHD1Q6GMV3 140 aaKnown RBP17.04■□□□□ 0.32
FAM3A-222ENST00000621967 GPR141Q7Z602 305 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 RALGPS2Q86X27 583 aaPredicted RBP17.04■□□□□ 0.32
FAM3A-222ENST00000621967 LKAAEAR1Q8TD35 194 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 WFIKKN2Q8TEU8 576 aa17.04■□□□□ 0.32
FAM3A-222ENST00000621967 CHFRQ96EP1 664 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms