RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 TMEM138Q9NPI0 162 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 NPAP1Q9NZP6 1156 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 UBQLN1Q9UMX0 589 aaKnown RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 TRAV20A0A0B4J274 112 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 NR2F6P10588 404 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 SOAT1P35610 550 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 CXCR3P49682 368 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 CDH18Q13634 790 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 GPR19Q15760 415 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 CTF1Q16619 201 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 DUSP7Q16829 419 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 MFSD4AQ8N468 514 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 DYNC2LI1Q8TCX1 351 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 SCRN2Q96FV2 425 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 COQ10AQ96MF6 247 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 MGLLQ99685 303 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 RNF167Q9H6Y7 350 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 SLC13A4Q9UKG4 626 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 RAB23Q9ULC3 237 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 HRH3Q9Y5N1 445 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 SLC22A5O76082 557 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 MT-CYBP00156 380 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 CAPNS1P04632 268 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 MYL3P08590 195 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 ADARB1P78563 741 aaKnown RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 SMCO1Q147U7 214 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 OR2T5Q6IEZ7 315 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 TXNDC11Q6PKC3 985 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 PHACTR4Q8IZ21 702 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 IL17RDQ8NFM7 739 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 OR2T29Q8NH02 315 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 RANBP3Q9H6Z4 567 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 B3GNT2Q9NY97 397 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 MAP3K20Q9NYL2 800 aaKnown RBP13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZNF451Q9Y4E5 1061 aa13.29□□□□□ -0.28
PPP4R3B-205ENST00000616288 GSAPA4D1B5 854 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 CKMT1AP12532 417 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 FEN1P39748 380 aaKnown RBP13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 APLP1P51693 650 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 CLCNKBP51801 687 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 TGFB2P61812 414 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 RPP38P78345 283 aaKnown RBP13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 CREB3L2Q70SY1 520 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 PAPD5Q8NDF8 572 aaKnown RBP13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 PPP1R13LQ8WUF5 828 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZFP3Q96NJ6 502 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 PTGFRNQ9P2B2 879 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 HCN2Q9UL51 889 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 VPS26AO75436 327 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 HPRP00739 348 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 SLC35E2BP0CK96 405 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 SLC2A3P11169 496 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ERVK-21P61565 698 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 PRKCDQ05655 676 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 GALNT2Q10471 571 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZNF235Q14590 738 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 PRSS48Q7RTY5 328 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ACVR1CQ8NER5 493 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 TSSK3Q96PN8 268 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 TAS2R13Q9NYV9 303 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 RFXANKO14593 260 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 OR4F21O95013 312 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 AKAP5P24588 427 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ERVK-25P63136 954 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 USF2Q15853 346 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 BCL2L15Q5TBC7 163 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ILDR2Q71H61 639 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 IZUMO1Q8IYV9 350 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 SPAG16Q8N0X2 631 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 STK40Q8N2I9 435 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZNF614Q8N883 585 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 SPON2Q9BUD6 331 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 PRKD2Q9BZL6 878 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 TMEM39AQ9NV64 488 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 GPR83Q9NYM4 423 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
PPP4R3B-205ENST00000616288 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 METTL15A6NJ78 407 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 ERVH48-1M5A8F1 160 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 TNFRSF11BO00300 401 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 IL18RAPO95256 599 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 CTRB1P17538 263 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 ADRA2BP18089 450 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 FOXM1Q08050 763 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 CTRB2Q6GPI1 263 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 GPSM1Q86YR5 675 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 TMEM151AQ8N4L1 468 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 DTWD1Q8N5C7 304 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms