RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ZNF641Q96N77 438 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SPATA13Q96N96 652 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 OLFM3Q96PB7 478 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CATSPERZQ9NTU4 200 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SPATS2LQ9NUQ6 558 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 IRAK4Q9NWZ3 460 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 RCOR3Q9P2K3 495 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 FBLN5Q9UBX5 448 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PLAGL1Q9UM63 463 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TDRKHQ9Y2W6 561 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PCDHB1Q9Y5F3 818 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PCDHGA5Q9Y5G8 931 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SLC30A1Q9Y6M5 507 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 LRRK1Q38SD2 2015 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PCDH15Q96QU1 1955 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 VILLO15195 856 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PIAS2O75928 621 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 NDST3O95803 873 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 STATHP02808 62 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 ZNF8P17098 575 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CR2P20023 1033 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 EPHA8P29322 1005 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 MC4RP32245 332 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CTSCP53634 463 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 OR1D5P58170 312 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SF3A3Q12874 501 aaKnown RBP eCLIP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 ILF3Q12906 894 aaKnown RBP eCLIP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PMS2P11Q13670 270 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PRKD1Q15139 912 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 FAM209BQ5JX69 171 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 COLEC12Q5KU26 742 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 HES3Q5TGS1 186 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 LRRC38Q5VT99 294 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 ITPRIPL1Q6GPH6 555 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 LIN54Q6MZP7 749 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 KIAA1161Q6NSJ0 714 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 TMEM220Q6QAJ8 160 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 C1orf229Q6ZS94 237 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 OVCH1Q7RTY7 1134 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 EXOC3L1Q86VI1 746 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 MFSD2AQ8NA29 543 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 TP53I13Q8NBR0 393 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 MAPK15Q8TD08 544 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 NCSTNQ92542 709 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 HDAC10Q969S8 669 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PRR11Q96HE9 360 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 DHRS1Q96LJ7 313 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 NAP1L3Q99457 506 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CTRCQ99895 268 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SELENOSQ9BQE4 189 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 WDR12Q9GZL7 423 aaKnown RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 ZMAT3Q9HA38 289 aaKnown RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PKD2L2Q9NZM6 624 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 ST14Q9Y5Y6 855 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PIKFYVEQ9Y2I7 2098 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 IGSF10Q6WRI0 2623 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 GOLGA6L10A0A0M3HER8 536 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 GLYATL1P3A0A0U1RQE8 302 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SPTY2D1-AS1A0A0U1RR47 76 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 A0A1W2PR77 199 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PRSS38A1L453 326 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CAPN8A6NHC0 703 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SMIM23A6NLE4 172 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 RHPN2P1A8MT19 583 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 PROB1E7EW31 1015 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 ALOX15BO15296 676 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 RGS16O15492 202 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SNX3O60493 162 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 VAPBO95292 243 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CKMT1AP12532 417 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CREB1P16220 341 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 HOXA6P31267 233 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 GRK6P43250 576 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 RABIFP47224 123 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 NR2C2P49116 596 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SPINT3P49223 89 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 NCALDP61601 193 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 HNRNPKP61978 463 aaKnown RBP eCLIP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 HSPA14Q0VDF9 509 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 TARDBPQ13148 414 aaKnown RBP eCLIP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 RIPK1Q13546 671 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 GTF2H3Q13889 308 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 NFE2L1Q14494 772 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 RFTN1Q14699 578 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SUZ12Q15022 739 aaKnown RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 HIBCHQ6NVY1 386 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 TRPM8Q7Z2W7 1104 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 B3GNT8Q7Z7M8 397 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 C11orf74Q86VG3 221 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 SLC35F3Q8IY50 421 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CFAP206Q8IYR0 622 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 ASB12Q8WXK4 309 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 N4BP2L2Q92802 583 aaPredicted RBP4.86□□□□□ -1.63
SYCP1-209ENST00000613524 VOPP1Q96AW1 172 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 DTD2Q96FN9 168 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 DCUN1D1Q96GG9 259 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 TBC1D10AQ9BXI6 508 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 CLPBQ9H078 707 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 MYLK2Q9H1R3 596 aa4.86□□□□□ -1.63
SYCP1-209ENST00000613524 GBA3Q9H227 469 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms