RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 POLR3HQ9Y535 204 aaPredicted RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 LRRC72A6NJI9 287 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 C12orf71A8MTZ7 269 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 WNT9AO14904 365 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 SCELO95171 688 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 TOP3BO95985 862 aaKnown RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 GPIP06744 558 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 LRP8Q14114 963 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ALFQ53S48 1182 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 C14orf80Q86SX3 495 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 CHPFQ8IZ52 775 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 DSELQ8IZU8 1212 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 AVL9Q8NBF6 648 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 MCFD2Q8NI22 146 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 USP7Q93009 1102 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 CCM2Q9BSQ5 444 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 DHRS4Q9BTZ2 278 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 TDRD1Q9BXT4 1180 aaKnown RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FBRSQ9HAH7 460 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 SGK2Q9HBY8 427 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ANKHQ9HCJ1 492 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 RPS6KB2Q9UBS0 482 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 GPSM3Q9Y4H4 160 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 MRPL42Q9Y6G3 142 aaKnown RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 STON1Q9Y6Q2 735 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ARFGEF1Q9Y6D6 1849 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 A8MT66 165 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 LOC110117498-PIK3R3F6TDL0 507 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 I3L521 148 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 AHSGP02765 367 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 AOC1P19801 751 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 GRIA1P42261 906 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 VBP1P61758 197 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FAM189BP81408 668 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 TIMM50Q3ZCQ8 353 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FAM92BQ6ZTR7 304 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 PHC2Q8IXK0 858 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 CPXM2Q8N436 756 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 PIK3R3Q92569 461 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 RAB7BQ96AH8 199 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ZNF486Q96H40 463 aaPredicted RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 NOL11Q9H8H0 719 aaKnown RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 HPS4Q9NQG7 708 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ITM2CQ9NQX7 267 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 MRPS17Q9Y2R5 130 aaKnown RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FAM72CH0Y354 149 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FAM20BO75063 409 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 RFPL1O75677 317 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 NTRK1P04629 796 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FAM72AQ5TYM5 149 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FAM72DQ6L9T8 149 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ZNF621Q6ZSS3 439 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 C11orf96Q7Z7L8 435 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 FAM72BQ86X60 149 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 CACNG4Q9UBN1 327 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ABCG2Q9UNQ0 655 aa8.55□□□□□ -1.04
PDE6A-204ENST00000613228 TNS1Q9HBL0 1735 aaKnown RBP8.55□□□□□ -1.04
PDE6A-204ENST00000613228 ARHGEF15O94989 841 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 CDK4P11802 303 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 CDH1P12830 882 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 NDUFS1P28331 727 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 ERVK-8P63133 956 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 IRF9Q00978 393 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 DSC1Q08554 894 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 GRSF1Q12849 480 aaKnown RBP eCLIP8.54□□□□□ -1.04
PDE6A-204ENST00000613228 ZC3H12BQ5HYM0 836 aaKnown RBP8.54□□□□□ -1.04
PDE6A-204ENST00000613228 ATXN7L2Q5T6C5 722 aaPredicted RBP8.54□□□□□ -1.04
PDE6A-204ENST00000613228 SLC8B1Q6J4K2 584 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 KRT74Q7RTS7 529 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 RBM15BQ8NDT2 890 aaKnown RBP8.54□□□□□ -1.04
PDE6A-204ENST00000613228 FAR1Q8WVX9 515 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 GATA6Q92908 595 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 TMCO6Q96DC7 493 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 GAS2L1Q99501 681 aaPredicted RBP8.54□□□□□ -1.04
PDE6A-204ENST00000613228 TTLL2Q9BWV7 592 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 MT-CO1P00395 513 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 ETV3P41162 512 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
PDE6A-204ENST00000613228 PCLAFQ15004 111 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 NCEH1Q6PIU2 408 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 IGDCC3Q8IVU1 814 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 SLC39A11Q8N1S5 342 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 NAT16Q8N8M0 369 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 TRPV1Q8NER1 839 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 OR2T34Q8NGX1 318 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 OR6K2Q8NGY2 324 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 OR2T3Q8NH03 318 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 BPIFB1Q8TDL5 484 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 ERLEC1Q96DZ1 483 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 NARS2Q96I59 477 aaKnown RBP8.54□□□□□ -1.04
PDE6A-204ENST00000613228 OR52E6Q96RD3 313 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 MIPEPQ99797 713 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 REEP1Q9H902 201 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 SEMA3GQ9NS98 782 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 SNX7Q9UNH6 387 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 ASF1AQ9Y294 204 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 ADAMTSL1Q8N6G6 1762 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 FOCADQ5VW36 1801 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 DHRS12A0PJE2 317 aa8.54□□□□□ -1.04
PDE6A-204ENST00000613228 TK2O00142 265 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms