RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 AOAHP28039 575 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 PKLRP30613 574 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 KCNJ1P48048 391 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 CRADDP78560 199 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 CDK16Q00536 496 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 NCF4Q15080 339 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 TPSAB1Q15661 275 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 ZIC1Q15915 447 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 KYNUQ16719 465 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 PTCHD3Q3KNS1 767 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 LRRC8BQ6P9F7 803 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 FAM198BQ6UWH4 519 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 VRK3Q8IV63 474 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 KRT222Q8N1A0 295 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 CFAP61Q8NHU2 1237 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 FLVCR1-AS1Q8TAF5 88 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 SLC22A18Q96BI1 424 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 DHRS4Q9BTZ2 278 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 TRIM55Q9BYV6 548 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 MRM3Q9HC36 420 aaKnown RBP16.75■□□□□ 0.27
PRKN-209ENST00000612485 PADI2Q9Y2J8 665 aa16.75■□□□□ 0.27
PRKN-209ENST00000612485 K7EM74 188 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 KPNA5O15131 536 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 SLCO2B1O94956 709 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 CAPN1P07384 714 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 SPTBP11277 2137 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 RPS3P23396 243 aaKnown RBP eCLIP16.74■□□□□ 0.27
PRKN-209ENST00000612485 MGAT1P26572 445 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 NMBRP28336 390 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 PEBP1P30086 187 aaKnown RBP16.74■□□□□ 0.27
PRKN-209ENST00000612485 GABRA4P48169 554 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 SARNPP82979 210 aaKnown RBP16.74■□□□□ 0.27
PRKN-209ENST00000612485 DEFB110Q30KQ9 67 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 CPZQ66K79 652 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 TLDC1Q6P9B6 456 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 TTC23LQ6PF05 361 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 OTUD6BQ8N6M0 293 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 PROKR1Q8TCW9 393 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 ADAMTS17Q8TE56 1095 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 KIFC1Q9BW19 673 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 ING2Q9H160 280 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 P2RY12Q9H244 342 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 IRAK4Q9NWZ3 460 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 PLCL2Q9UPR0 1127 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 PCDHGA9Q9Y5G4 932 aaKnown RBP16.74■□□□□ 0.27
PRKN-209ENST00000612485 MRFAP1Q9Y605 127 aa16.74■□□□□ 0.27
PRKN-209ENST00000612485 SETXQ7Z333 2677 aaKnown RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 PFDN6O15212 129 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 ZSCAN9O15535 394 aaPredicted RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 TMEM63AO94886 807 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 CD9P21926 228 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 CXCR5P32302 372 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 PTGIRP43119 386 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 CCL11P51671 97 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 FOXK1P85037 733 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 CCZ1BP86790 482 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 CCZ1P86791 482 aaPredicted RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 CHAF1BQ13112 559 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 ZNF385CQ66K41 422 aaPredicted RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 MRNIPQ6NTE8 343 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 RHBDD2Q6NTF9 364 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 OTOAQ7RTW8 1153 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 SDCCAG8Q86SQ7 713 aaPredicted RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 DNAJC22Q8N4W6 341 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 SLC25A23Q9BV35 468 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 RAB11FIP5Q9BXF6 653 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 SPRTNQ9H040 489 aaPredicted RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 INTS7Q9NVH2 962 aaKnown RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 SYBUQ9NX95 663 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 GPN3Q9UHW5 284 aaPredicted RBP16.73■□□□□ 0.27
PRKN-209ENST00000612485 SLC39A10Q9ULF5 831 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 SRPK3Q9UPE1 567 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 PPP2R2CQ9Y2T4 447 aa16.73■□□□□ 0.27
PRKN-209ENST00000612485 UBR5O95071 2799 aaPredicted RBP16.72■□□□□ 0.27
PRKN-209ENST00000612485 H3BMH7 237 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 RASGRF2O14827 1237 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 S1PR4O95977 384 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 CD63P08962 238 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 PGDP52209 483 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 EIF3BP55884 814 aaKnown RBP16.72■□□□□ 0.27
PRKN-209ENST00000612485 RNF187Q5TA31 235 aaPredicted RBP16.72■□□□□ 0.27
PRKN-209ENST00000612485 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 RAB43Q86YS6 212 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 RAB42Q8N4Z0 105 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 PRELID2Q8N945 189 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 LINC01555Q8NAE3 123 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 OR2L8Q8NGY9 312 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 RAD51AP1Q96B01 352 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 MFSD3Q96ES6 412 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 MENTQ9BUN1 341 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 TXLNGQ9NUQ3 528 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.72■□□□□ 0.27
PRKN-209ENST00000612485 TTC7AQ9ULT0 858 aaPredicted RBP16.72■□□□□ 0.27
PRKN-209ENST00000612485 SOX13Q9UN79 622 aa16.72■□□□□ 0.27
PRKN-209ENST00000612485 G3BP2Q9UN86 482 aaKnown RBP16.72■□□□□ 0.27
PRKN-209ENST00000612485 SPENQ96T58 3664 aaKnown RBP16.71■□□□□ 0.27
PRKN-209ENST00000612485 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.71■□□□□ 0.27
PRKN-209ENST00000612485 H3BMM5 538 aa16.71■□□□□ 0.27
PRKN-209ENST00000612485 HCRTR1O43613 425 aa16.71■□□□□ 0.27
PRKN-209ENST00000612485 VAPBO95292 243 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms