RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 VRK3Q8IV63 474 aa22.47■■□□□ 1.19
MBD3-211ENST00000592965 MPP5Q8N3R9 675 aa22.47■■□□□ 1.19
MBD3-211ENST00000592965 TRIM58Q8NG06 486 aa22.47■■□□□ 1.19
MBD3-211ENST00000592965 PLAGL1Q9UM63 463 aa22.47■■□□□ 1.19
MBD3-211ENST00000592965 AP1M2Q9Y6Q5 423 aa22.47■■□□□ 1.19
MBD3-211ENST00000592965 ANKRD12Q6UB98 2062 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 CD3EAPO15446 510 aaKnown RBP22.46■■□□□ 1.19
MBD3-211ENST00000592965 SLCO2B1O94956 709 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 APOA4P06727 396 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 AOAHP28039 575 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 PEBP1P30086 187 aaKnown RBP22.46■■□□□ 1.19
MBD3-211ENST00000592965 NPY2RP49146 381 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 CRADDP78560 199 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 BASP1P80723 227 aaKnown RBP22.46■■□□□ 1.19
MBD3-211ENST00000592965 KYNUQ16719 465 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 UNC5DQ6UXZ4 953 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 GSTA5Q7RTV2 222 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 LDB1Q86U70 411 aaPredicted RBP22.46■■□□□ 1.19
MBD3-211ENST00000592965 DCUN1D3Q8IWE4 304 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 N4BP2L2Q92802 583 aaPredicted RBP22.46■■□□□ 1.19
MBD3-211ENST00000592965 MENTQ9BUN1 341 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 SLC7A5P2Q9GIP4 190 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 BFARQ9NZS9 450 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 PCDHGA9Q9Y5G4 932 aaKnown RBP22.46■■□□□ 1.19
MBD3-211ENST00000592965 CCDC88CQ9P219 2028 aa22.46■■□□□ 1.19
MBD3-211ENST00000592965 ARGFXA6NJG6 315 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 IQCF5A8MTL0 148 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 C9J4A7 227 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 OR2B3O76000 313 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 PTGIRP43119 386 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 CDK16Q00536 496 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 TMED2Q15363 201 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 DEFB110Q30KQ9 67 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 LRRC6Q86X45 466 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 TEX19Q8NA77 164 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 ING2Q9H160 280 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 P2RY12Q9H244 342 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 MRM3Q9HC36 420 aaKnown RBP22.45■■□□□ 1.18
MBD3-211ENST00000592965 HOMER3Q9NSC5 361 aa22.45■■□□□ 1.18
MBD3-211ENST00000592965 USP9XQ93008 2570 aaPredicted RBP22.45■■□□□ 1.18
MBD3-211ENST00000592965 ISM1B1AKI9 464 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 HCRTR1O43613 425 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 PDGFAP04085 211 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 TPSB2P20231 275 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 AGXTP21549 392 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 KCNJ1P48048 391 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 CHAF1BQ13112 559 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 TPSAB1Q15661 275 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 RHBDD2Q6NTF9 364 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 LRRC8AQ8IWT6 810 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 KRT222Q8N1A0 295 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 LINC01555Q8NAE3 123 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 PROKR1Q8TCW9 393 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 PANX3Q96QZ0 392 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 C17orf62Q9BQA9 187 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 DHRS4Q9BTZ2 278 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 KIFC1Q9BW19 673 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 MLXIPLQ9NP71 852 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 ACSS2Q9NR19 701 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 GNPTGQ9UJJ9 305 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 PADI2Q9Y2J8 665 aa22.44■■□□□ 1.18
MBD3-211ENST00000592965 ZSCAN9O15535 394 aaPredicted RBP22.43■■□□□ 1.18
MBD3-211ENST00000592965 CEP104O60308 925 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 RPS3P23396 243 aaKnown RBP eCLIP22.43■■□□□ 1.18
MBD3-211ENST00000592965 NMBRP28336 390 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 PGDP52209 483 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 CCZ1BP86790 482 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 CCZ1P86791 482 aaPredicted RBP22.43■■□□□ 1.18
MBD3-211ENST00000592965 GRB7Q14451 532 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 FAM69BQ5VUD6 431 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 PAPD7Q5XG87 772 aaKnown RBP22.43■■□□□ 1.18
MBD3-211ENST00000592965 PTRHD1Q6GMV3 140 aaKnown RBP22.43■■□□□ 1.18
MBD3-211ENST00000592965 DNAJC22Q8N4W6 341 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 SLC25A23Q9BV35 468 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 SRPK3Q9UPE1 567 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 PLCL2Q9UPR0 1127 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 NAV2Q8IVL1 2488 aa22.43■■□□□ 1.18
MBD3-211ENST00000592965 CEACAM4O75871 244 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 MGAT1P26572 445 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 ARNTP27540 789 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 ARMC3Q5W041 872 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 TLDC1Q6P9B6 456 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 LRRC8BQ6P9F7 803 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 PRELID2Q8N945 189 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 CFAP61Q8NHU2 1237 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 SLC22A18Q96BI1 424 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 GBP5Q96PP8 586 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 SPRTNQ9H040 489 aaPredicted RBP22.42■■□□□ 1.18
MBD3-211ENST00000592965 SYBUQ9NX95 663 aa22.42■■□□□ 1.18
MBD3-211ENST00000592965 KPNA5O15131 536 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 NDUFS3O75489 264 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 TMEM63AO94886 807 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 S1PR4O95977 384 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 CD9P21926 228 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 IGFBP7Q16270 282 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 COLEC12Q5KU26 742 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 ZBTB2Q8N680 514 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 OR2L8Q8NGY9 312 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 RAB11FIP5Q9BXF6 653 aa22.41■■□□□ 1.18
MBD3-211ENST00000592965 SOX13Q9UN79 622 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms