RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MYRIPQ8NFW9 859 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 OR4E2Q8NGC2 313 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 ASZ1Q8WWH4 475 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 LCN9Q8WX39 176 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 FCRL3Q96P31 734 aaPredicted RBP10.08□□□□□ -0.8
SDF2-208ENST00000589788 PANX3Q96QZ0 392 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 TRIM56Q9BRZ2 755 aaKnown RBP10.08□□□□□ -0.8
SDF2-208ENST00000589788 TRIM51Q9BSJ1 452 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 LRRC1Q9BTT6 524 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 HGH1Q9BTY7 390 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 ASPSCR1Q9BZE9 553 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 DPH1Q9BZG8 443 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 B3GNT4Q9C0J1 378 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 RAB33BQ9H082 229 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 SRMSQ9H3Y6 488 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 HRASLS2Q9NWW9 162 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 OCIAD1Q9NX40 245 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 EPHA6Q9UF33 1036 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 ASF1AQ9Y294 204 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 PKD1L2Q7Z442 2459 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 SLC5A10A0PJK1 596 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 OR5K3A6NET4 321 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 IQCF5A8MTL0 148 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 C9orf172C9J069 976 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 H3BMM5 538 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 KLK10O43240 276 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 KDM1AO60341 852 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 USP1O94782 785 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 PGAM1P18669 254 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 RPS3P23396 243 aaKnown RBP eCLIP10.07□□□□□ -0.85e-7■■□□□ 12.2
SDF2-208ENST00000589788 IVDP26440 423 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 CD82P27701 267 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ITPKBP27987 946 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 CCR7P32248 378 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ARCN1P48444 511 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 ARL4DP49703 201 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 SEPHS1P49903 392 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 PLAURQ03405 335 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 PRKG2Q13237 762 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 MORF4L2Q15014 288 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 LONRF1Q17RB8 773 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TYSND1Q2T9J0 566 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 COL28A1Q2UY09 1125 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 BBS9Q3SYG4 887 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 OTOAQ7RTW8 1153 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 PRSS42Q7Z5A4 293 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TMEM135Q86UB9 458 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 CILP2Q8IUL8 1156 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 PDIK1LQ8N165 341 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 KRT222Q8N1A0 295 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 GABPB2Q8TAK5 448 aaPredicted RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 CALML6Q8TD86 181 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 UBXN4Q92575 508 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 SNF8Q96H20 258 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 SIGLEC10Q96LC7 697 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 NSUN5Q96P11 429 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 CD180Q99467 661 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 NAT9Q9BTE0 207 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 DDA1Q9BW61 102 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TRIM31Q9BZY9 425 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 RAB17Q9H0T7 212 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 P2RY12Q9H244 342 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TRIT1Q9H3H1 467 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 ZNF768Q9H5H4 540 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 C20orf96Q9NUD7 363 aaPredicted RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 IL1RAPL1Q9NZN1 696 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 POLG2Q9UHN1 485 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 CRYL1Q9Y2S2 319 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 BPTFQ12830 3046 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ADAMTS20P59510 1910 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ZCWPW2A0A1B0GU75 182 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 GSAPA4D1B5 854 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 MATN2O00339 956 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 NDC80O14777 642 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 POLR1CO15160 346 aaPredicted RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 CTIFO43310 598 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 KIF1CO43896 1103 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 TTC4O95801 387 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ESR1P03372 595 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 RPN2P04844 631 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 POLR2CP19387 275 aaPredicted RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 AOAHP28039 575 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ACADLP28330 430 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 FMO4P31512 558 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ITGA8P53708 1063 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 UCNP55089 124 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 PPP1CAP62136 330 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 MC2RQ01718 297 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TLE3Q04726 772 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 FOXM1Q08050 763 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ERCC6LQ2NKX8 1250 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ANKS6Q68DC2 871 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 CEACAM20Q6UY09 585 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ZFAND4Q86XD8 727 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 LMNTD2Q8IXW0 634 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TBC1D21Q8IYX1 336 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 SLC22A15Q8IZD6 547 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 AGGF1Q8N302 714 aaeCLIP10.07□□□□□ -0.8
SDF2-208ENST00000589788 BMPERQ8N8U9 685 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 BBOF1Q8ND07 529 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms