RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 SGCGQ13326 291 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 NAE1Q13564 534 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 NR6A1Q15406 480 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 PRAMEF9Q5VWM5 478 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 AGTRAPQ6RW13 159 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 RIPOR1Q6ZS17 1223 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 FBXW8Q8N3Y1 598 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 TP53I13Q8NBR0 393 aaPredicted RBP10.9□□□□□ -0.66
GGA3-213ENST00000582486 PPFIBP2Q8ND30 876 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
GGA3-213ENST00000582486 HM13Q8TCT9 377 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 CCDC124Q96CT7 223 aaKnown RBP10.9□□□□□ -0.66
GGA3-213ENST00000582486 SIPA1Q96FS4 1042 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 TEX37Q96LM6 180 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 CDRT15Q96T59 188 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 TEX101Q9BY14 249 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 WDR26Q9H7D7 661 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 WDR41Q9HAD4 459 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 FBRSQ9HAH7 460 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 DNAJC11Q9NVH1 559 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 AIG1Q9NVV5 245 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 SLC23A2Q9UGH3 650 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 ZNF490Q9ULM2 529 aaPredicted RBP10.9□□□□□ -0.66
GGA3-213ENST00000582486 COL4A2P08572 1712 aa10.9□□□□□ -0.66
GGA3-213ENST00000582486 TMEM265A0A087WTH1 108 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3DA0A087WVF3 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3IA0A087WXS9 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3EA0A087X179 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3KA0A087X1G2 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3FA6NER0 549 aaPredicted RBP10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3LB9A6J9 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 MANBAO00462 879 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 NR5A2O00482 541 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 NRP2O60462 931 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 RNGTTO60942 597 aaKnown RBP10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3HP0C7X1 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 IMPA1P29218 277 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 MAT2AP31153 395 aaKnown RBP10.9□□□□□ -0.67
GGA3-213ENST00000582486 TRIM23P36406 574 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 MAPK9P45984 424 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 MTTPP55157 894 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 MRPS21P82921 87 aaKnown RBP10.9□□□□□ -0.67
GGA3-213ENST00000582486 HMGCS1Q01581 520 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 LRP8Q14114 963 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 AP5B1Q2VPB7 878 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 RFTN2Q52LD8 501 aaPredicted RBP10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3GQ6DHY5 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3CQ6IPX1 549 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 FAM124AQ86V42 546 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 AMZ2Q86W34 360 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TBC1D3Q8IZP1 549 aaPredicted RBP10.9□□□□□ -0.67
GGA3-213ENST00000582486 PGAM4Q8N0Y7 254 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 RPLP0P6Q8NHW5 317 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 ATL1Q8WXF7 558 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 DNASE1L2Q92874 299 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 MED8Q96G25 268 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 GAS2L1Q99501 681 aaPredicted RBP10.9□□□□□ -0.67
GGA3-213ENST00000582486 C1QTNF2Q9BXJ5 285 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 SLC17A9Q9BYT1 436 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 RNPEPL1Q9HAU8 725 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 TM7SF3Q9NS93 570 aa10.9□□□□□ -0.67
GGA3-213ENST00000582486 ACTR3P61158 418 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 UFM1P61960 85 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 SMAD4Q13485 552 aaKnown RBP10.89□□□□□ -0.67
GGA3-213ENST00000582486 TRMT5Q32P41 509 aaKnown RBP10.89□□□□□ -0.67
GGA3-213ENST00000582486 VPS26BQ4G0F5 336 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 TMEM259Q4ZIN3 620 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 C6orf163Q5TEZ5 329 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 KIAA1161Q6NSJ0 714 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 TRIM46Q7Z4K8 759 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 LRRTM4Q86VH4 590 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 THOC6Q86W42 341 aaKnown RBP10.89□□□□□ -0.67
GGA3-213ENST00000582486 USP7Q93009 1102 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 SLC29A3Q9BZD2 475 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 BRINP2Q9C0B6 783 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 DPEP2Q9H4A9 486 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 UBE2ZQ9H832 354 aaPredicted RBP10.89□□□□□ -0.67
GGA3-213ENST00000582486 CD93Q9NPY3 652 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 NDE1Q9NXR1 346 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 KCNE1BA0A087WTH5 132 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 SHISA7A6NL88 538 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 MRASO14807 208 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 RGS14O43566 566 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 KRT6AP02538 564 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 KRT6BP04259 564 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 CAPN3P20807 821 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 ACADLP28330 430 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 HALP42357 657 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 KRT6CP48668 564 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 NEK2P51955 445 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 PLOD1Q02809 727 aaPredicted RBP10.89□□□□□ -0.67
GGA3-213ENST00000582486 EMX2Q04743 252 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 CHIT1Q13231 466 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 SKIV2LQ15477 1246 aaKnown RBP10.89□□□□□ -0.67
GGA3-213ENST00000582486 GGTA1PQ4G0N0 100 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 LAYNQ6UX15 382 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 BNC2Q6ZN30 1099 aaPredicted RBP10.89□□□□□ -0.67
GGA3-213ENST00000582486 RETREG3Q86VR2 466 aa10.89□□□□□ -0.67
GGA3-213ENST00000582486 RGL4Q8IZJ4 473 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms