RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 OR56A5P0C7T3 313 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 PTPN7P35236 360 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 MARCKSL1P49006 195 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 PER3P56645 1201 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 RWDD2BP57060 319 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 SPARCL1Q14515 664 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 ITIH4Q14624 930 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 SLC5A12Q1EHB4 618 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 LINC00523Q86TU6 105 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 ZNF655Q8N720 491 aaPredicted RBP17.26■□□□□ 0.35
MKS1-209ENST00000580127 OR5AR1Q8NGP9 310 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 KRT35Q92764 455 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 GORASP1Q9BQQ3 440 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 TSSK1BQ9BXA7 367 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 ZNF552Q9H707 407 aaPredicted RBP17.26■□□□□ 0.35
MKS1-209ENST00000580127 FAM60AQ9NP50 221 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 INTS7Q9NVH2 962 aaKnown RBP17.26■□□□□ 0.35
MKS1-209ENST00000580127 ERRFI1Q9UJM3 462 aaPredicted RBP17.26■□□□□ 0.35
MKS1-209ENST00000580127 MDC1Q14676 2089 aaKnown RBP17.25■□□□□ 0.35
MKS1-209ENST00000580127 AGPSO00116 658 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 CCL22O00626 93 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 PJA2O43164 708 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 LDLRP01130 860 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 ATXN8OSP0DMR3 200 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 TPH1P17752 444 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 ITGAXP20702 1163 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 ITGA3P26006 1051 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 CTNNA1P35221 906 aaKnown RBP17.25■□□□□ 0.35
MKS1-209ENST00000580127 CDKN1CP49918 316 aaPredicted RBP17.25■□□□□ 0.35
MKS1-209ENST00000580127 OLIG2Q13516 323 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 P3H1Q32P28 736 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 ZNF658BQ4V348 819 aaPredicted RBP17.25■□□□□ 0.35
MKS1-209ENST00000580127 AGAP7PQ5VUJ5 663 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 OR5K2Q8NHB8 316 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 AGAP4Q96P64 663 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 DHCR7Q9UBM7 475 aaKnown RBP17.25■□□□□ 0.35
MKS1-209ENST00000580127 CDYLQ9Y232 598 aa17.25■□□□□ 0.35
MKS1-209ENST00000580127 DOPEY1Q5JWR5 2465 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 CNTRLQ7Z7A1 2325 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 ACADLP28330 430 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 POU6F1Q14863 301 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 BRD3Q15059 726 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 DBN1Q16643 649 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 DNAJC21Q5F1R6 531 aaKnown RBP17.24■□□□□ 0.35
MKS1-209ENST00000580127 ZC3H12BQ5HYM0 836 aaKnown RBP17.24■□□□□ 0.35
MKS1-209ENST00000580127 YOD1Q5VVQ6 348 aaPredicted RBP17.24■□□□□ 0.35
MKS1-209ENST00000580127 MRPL14Q6P1L8 145 aaKnown RBP17.24■□□□□ 0.35
MKS1-209ENST00000580127 TTC23LQ6PF05 361 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 Q6ZS92 163 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 TRIM73Q86UV7 250 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 SLC34A3Q8N130 599 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 DNAJC22Q8N4W6 341 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 MRM3Q9HC36 420 aaKnown RBP17.24■□□□□ 0.35
MKS1-209ENST00000580127 EURLQ9NYK6 297 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.24■□□□□ 0.35
MKS1-209ENST00000580127 ITPR2Q14571 2701 aa17.24■□□□□ 0.35
MKS1-209ENST00000580127 ALBP02768 609 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 MMP11P24347 488 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 MSNP26038 577 aaKnown RBP17.23■□□□□ 0.35
MKS1-209ENST00000580127 DCTP40126 519 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 ZIC1Q15915 447 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 DEFB110Q30KQ9 67 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 FAM214AQ32MH5 1076 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 PACS1Q6VY07 963 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 PPP1R32Q7Z5V6 425 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 MCATQ8IVS2 390 aaKnown RBP17.23■□□□□ 0.35
MKS1-209ENST00000580127 DNAJB14Q8TBM8 379 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 UBE2Q2Q8WVN8 375 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 FKBP10Q96AY3 582 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 WDR77Q9BQA1 342 aaPredicted RBP17.23■□□□□ 0.35
MKS1-209ENST00000580127 WDR54Q9H977 334 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 SPHK1Q9NYA1 384 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 CDC23Q9UJX2 597 aa17.23■□□□□ 0.35
MKS1-209ENST00000580127 NXT1Q9UKK6 140 aaKnown RBP17.23■□□□□ 0.35
MKS1-209ENST00000580127 H3BMH7 237 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 GABRA4P48169 554 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 RAB28P51157 221 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 TBX2Q13207 712 aaPredicted RBP17.22■□□□□ 0.35
MKS1-209ENST00000580127 SLC9A5Q14940 896 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 TCTE1Q5JU00 501 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 PRAMEF13Q5VWM6 474 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 TTLL10Q6ZVT0 673 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 OVCH1Q7RTY7 1134 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 PIANPQ8IYJ0 282 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 ST6GALNAC3Q8NDV1 305 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 GSDMBQ8TAX9 411 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 ASZ1Q8WWH4 475 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 MRFAP1L1Q96HT8 127 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 BARD1Q99728 777 aaKnown RBP17.22■□□□□ 0.35
MKS1-209ENST00000580127 NRTNQ99748 197 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 RUBCNLQ9H714 662 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 PCDHGA10Q9Y5H3 936 aa17.22■□□□□ 0.35
MKS1-209ENST00000580127 A0A1B0GX78 115 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 SLC5A10A0PJK1 596 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 MROH6A6NGR9 719 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 ERI2A8K979 691 aaKnown RBP17.21■□□□□ 0.35
MKS1-209ENST00000580127 FKBP9O95302 570 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 CLDN1O95832 211 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms