RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PLXND1Q9Y4D7 1925 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 A0A1B0GTQ1 180 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARHGEF33A8MVX0 844 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 UBXN8O00124 270 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 MEN1O00255 615 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 GIPC1O14908 333 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZW10O43264 779 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 FOXD2O60548 495 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 H2AFYO75367 372 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PSIP1O75475 530 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 IPO13O94829 963 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 WISP3O95389 354 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 MATN4O95460 622 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 LMNAP02545 664 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 FUCA1P04066 466 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PROCP04070 461 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CELA2BP08218 269 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CPA3P15088 417 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CHN1P15882 459 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ENGP17813 658 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ATP5F1P24539 256 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 GMPRP36959 345 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CSRP3P50461 194 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC18A1P54219 525 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 HHEXQ03014 270 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 TCF15Q12870 199 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 DLG1Q12959 904 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 TSTA3Q13630 321 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SUZ12Q15022 739 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 TLR1Q15399 786 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 TGFBIQ15582 683 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR4D1Q15615 310 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 RPE65Q16518 533 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF423Q2M1K9 1284 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 AASDHQ4L235 1098 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF658BQ4V348 819 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CFAP157Q5JU67 520 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 THEMIS2Q5TEJ8 643 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZCCHC8Q6NZY4 707 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 C16orf46Q6P387 395 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 WASH2PQ6VEQ5 465 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZYG11AQ6WRX3 759 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CDHR3Q6ZTQ4 885 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 TRIM42Q8IWZ5 723 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 RBM12BQ8IXT5 1001 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SYTL1Q8IYJ3 562 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PLD6Q8N2A8 252 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 MINDY1Q8N5J2 469 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARL10Q8N8L6 244 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PTGR2Q8N8N7 351 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR5AR1Q8NGP9 310 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCL4L1Q8NHW4 92 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PPP4R1Q8TF05 950 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ASB11Q8WXH4 323 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SH3KBP1Q96B97 665 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PTERQ96BW5 349 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 MED8Q96G25 268 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 EDEM2Q9BV94 578 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC12A9Q9BXP2 914 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SMOC1Q9H4F8 434 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 RDH14Q9HBH5 336 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 MLXIPLQ9NP71 852 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 WASH6PQ9NQA3 447 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 FAM86C1Q9NVL1 165 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 NLGN3Q9NZ94 848 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 NCKIPSDQ9NZQ3 722 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 TMEM216Q9P0N5 145 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SPATA7Q9P0W8 599 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC17A7Q9P2U7 560 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 COPG2Q9UBF2 871 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 KLF15Q9UIH9 416 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 LNPEPQ9UIQ6 1025 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ADAMTS6Q9UKP5 1117 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PCOLCE2Q9UKZ9 415 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 PNMA8BQ9ULN7 279 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 ANGPTL3Q9Y5C1 460 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 TNPO3Q9Y5L0 923 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 CSNK1G3Q9Y6M4 447 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 VCANP13611 3396 aa6.41□□□□□ -1.38
CTDNEP1-204ENST00000570484 LNP1A1A4G5 178 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 RHPN2P1A8MT19 583 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 A8MT66 165 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 STX16-NPEPL1H3BU86 382 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 STX16O14662 325 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 YY2O15391 372 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 BIRC5O15392 142 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCNT2O60583 730 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 C1orf105O95561 183 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CREB1P16220 341 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCND1P24385 295 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ACADLP28330 430 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 SHMT2P34897 504 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 HSD17B2P37059 387 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 NBL1P41271 181 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 RXRGP48443 463 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 SERPINB4P48594 390 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PIK3CGP48736 1102 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 HNMTP50135 292 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRKAA2P54646 552 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms