RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ZNF217O75362 1048 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 RECQL5O94762 991 aaPredicted RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 CELF2O95319 508 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 LCATP04180 440 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 VPREB1P12018 145 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 SKILP12757 684 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 PRF1P14222 555 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 HMGB2P26583 209 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 CALML3P27482 149 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 HOXC8P31273 242 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 GABRA5P31644 462 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 KIF5BP33176 963 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 KRT2P35908 639 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 RPL3P39023 403 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 NPY4RP50391 375 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 POLGP54098 1239 aaPredicted RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 HNRNPH2P55795 449 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 RPS8P62241 208 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 GSTO1P78417 241 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 FOXM1Q08050 763 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 HNF4GQ14541 408 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 SYCP1Q15431 976 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 PTPN14Q15678 1187 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 DECR1Q16698 335 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 MEP1AQ16819 746 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 HYAL4Q2M3T9 481 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 PAPPA-AS1Q5QFB9 102 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 ARMC4Q5T2S8 1044 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 ZNF626Q68DY1 528 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 TPRG1Q6ZUI0 275 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 NRROSQ86YC3 692 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 DZIP1Q86YF9 867 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 ARFGAP1Q8N6T3 406 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 PCDH20Q8N6Y1 951 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 TRIML1Q8N9V2 468 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 MLKLQ8NB16 471 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 CAMKVQ8NCB2 501 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 CCDC112Q8NEF3 446 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 CTCFLQ8NI51 663 aaPredicted RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 MPLKIPQ8TAP9 179 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 DEPDC1BQ8WUY9 529 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 NXNL1Q96CM4 212 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 SPACA9Q96E40 222 aaPredicted RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 OLFM1Q99784 485 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 CITED2Q99967 270 aaPredicted RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 RIOK1Q9BRS2 568 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 THUMPD3Q9BV44 507 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 XPO4Q9C0E2 1151 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 CNOT10Q9H9A5 744 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 KRCC1Q9NPI7 259 aaPredicted RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 TRNAU1APQ9NX07 287 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 TRMT1Q9NXH9 659 aaKnown RBP3.63□□□□□ -1.83
UBR1-211ENST00000569971 IFNKQ9P0W0 207 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 RNF7Q9UBF6 113 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 NARFQ9UHQ1 456 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 MROH7-TTC4A0A0A0MT08 1334 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 A0A1B0GUL6 1792 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 DUOX1Q9NRD9 1551 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 ECM29Q5VYK3 1845 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 LTBP4Q8N2S1 1624 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 IGLV5-39A0A0G2JS06 123 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 A0A1B0GVT2 93 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 TMEM189-UBE2V1I3L0A0 370 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ZSCAN12O43309 604 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 DDNO94850 711 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 SOX30O94993 753 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 SLU7O95391 586 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 BAG3O95817 575 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 PENKP01210 267 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 OR52Z1P0C646 297 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ACHEP22303 614 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 UGT1A1P22309 533 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 RFC4P35249 363 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ENTPD1P49961 510 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 UBASH3AP57075 661 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 TAS2R38P59533 333 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 DYNLL1P63167 89 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 PLIN5Q00G26 463 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 MECOMQ03112 1051 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 PNOCQ13519 176 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ZNF273Q14593 569 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 SYT16Q17RD7 645 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 SBK1Q52WX2 424 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 PPP6R3Q5H9R7 873 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 FSCBQ5H9T9 825 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 FNBP1LQ5T0N5 605 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 MPP7Q5T2T1 576 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ALS2CLQ60I27 953 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 FRG2Q64ET8 278 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 C18orf63Q68DL7 685 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 TYW3Q6IPR3 259 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 CTR9Q6PD62 1173 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 KCTD18Q6PI47 426 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 ERN2Q76MJ5 926 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 ADCK2Q7Z695 626 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 CENPVQ7Z7K6 275 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 ZNF595Q8IYB9 648 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 PDCL2Q8N4E4 241 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 EMC1Q8N766 993 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms