RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 STK17BO94768 372 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 MATN4O95460 622 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 C1orf105O95561 183 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 F7P08709 466 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CHRM5P08912 532 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 EBLN1P0CF75 366 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 MAP4P27816 1152 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 PKLRP30613 574 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CCNFP41002 786 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CARSP49589 748 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 TUBB4BP68371 445 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 PDIA2Q13087 525 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 TUBB3Q13509 450 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 GRB7Q14451 532 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 KCNAB1Q14722 419 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 KIR2DS3Q14952 304 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 TTLL9Q3SXZ7 439 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 ACSBG2Q5FVE4 666 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 STEAP4Q687X5 459 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 DUPD1Q68J44 220 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 INO80CQ6PI98 192 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CNSTQ6PJW8 725 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 KIAA0408Q6ZU52 694 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CNTN4Q8IWV2 1026 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CACNA2D3Q8IZS8 1091 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 SNRNP27Q8WVK2 155 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CFAP36Q96G28 342 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 TRAPPC9Q96Q05 1148 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 OR2A14Q96R47 310 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 AARSD1Q9BTE6 412 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 TWSG1Q9GZX9 223 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 RAB17Q9H0T7 212 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 DPH5Q9H2P9 285 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 SYTL2Q9HCH5 934 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 PPANQ9NQ55 473 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 FGF21Q9NSA1 209 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 SLC39A10Q9ULF5 831 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 DHRS7Q9Y394 339 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 UTP11Q9Y3A2 253 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 NFS1Q9Y697 457 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 MGAQ8IWI9 3026 aa13.37□□□□□ -0.27
HERPUD1-218ENST00000569569 CCDC88CQ9P219 2028 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 ISM1B1AKI9 464 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 EFSO43281 561 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 DLGAP3O95886 979 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 AHSGP02765 367 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 ST6GAL1P15907 406 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 UGT2B7P16662 529 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 CD9P21926 228 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 MAP7Q14244 749 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 FRG1Q14331 258 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 KLHL38Q2WGJ6 581 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 TEDDM1Q5T9Z0 273 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 UGT3A1Q6NUS8 523 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 NEK10Q6ZWH5 1172 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 TIPARPQ7Z3E1 657 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 GALNT7Q86SF2 657 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 ANKMY2Q8IV38 441 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 RAB42Q8N4Z0 105 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 FBXO36Q8NEA4 188 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 INPP5DQ92835 1189 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 SLC22A18Q96BI1 424 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 ZNF501Q96CX3 271 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 TRIM44Q96DX7 344 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 WDR83Q9BRX9 315 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 MENTQ9BUN1 341 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 RAB11FIP5Q9BXF6 653 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 ULBP3Q9BZM4 244 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 PLAC1Q9HBJ0 212 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 SPHK1Q9NYA1 384 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 MED16Q9Y2X0 877 aa13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 MDC1Q14676 2089 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-218ENST00000569569 A0A0J9YY10 115 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 KIF2AO00139 706 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 RASGRF2O14827 1237 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 VPS26AO75436 327 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 KIAA0754O94854 1291 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 MSL3P1P0C860 447 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 ENO3P13929 434 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 GABRB3P28472 473 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 BDKRB1P46663 353 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 CAV1Q03135 178 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 ABHD18Q0P651 414 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 SRSF6Q13247 344 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 GPR19Q15760 415 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 WHAMMP3Q1A5X7 153 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 SLC5A12Q1EHB4 618 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 VASH2Q86V25 355 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 ZBED8Q8IZ13 594 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 ESX1Q8N693 406 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 LINC01555Q8NAE3 123 aa13.35□□□□□ -0.27
HERPUD1-218ENST00000569569 ZSCAN1Q8NBB4 408 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms