RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 PROX2Q3B8N5 592 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 GTDC1Q4AE62 458 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 PGBD5Q8N414 524 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 ZNF599Q96NL3 588 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 SIK2Q9H0K1 926 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 ABCB8Q9NUT2 735 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 DCAF13Q9NV06 445 aaKnown RBP12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 ZNF225Q9UK10 706 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 POLR3HQ9Y535 204 aaPredicted RBP12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 PCDHB5Q9Y5E4 795 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 PDPK1O15530 556 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 TNFRSF21O75509 655 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 OR4F21O95013 312 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 TIE1P35590 1138 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 SLC19A1P41440 591 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 ARSDP51689 593 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 ELP6Q0PNE2 266 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 SLC14A2Q15849 920 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 KIAA1614Q5VZ46 1190 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 GPR153Q6NV75 609 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 SHQ1Q6PI26 577 aaKnown RBP12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 FCGR1BQ92637 280 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 COQ8BQ96D53 544 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 CAMKK2Q96RR4 588 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 RETREG1Q9H6L5 497 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 EXOSC4Q9NPD3 245 aaKnown RBP12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 MYLKQ15746 1914 aa12.09□□□□□ -0.47
SCAMP2-204ENST00000563829 EFCAB10A6NFE3 127 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ATP6V1G2-DDX39BF2Z307 99 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 I3L521 148 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ERN1O75460 977 aaKnown RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 S1PR4O95977 384 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 STSP08842 583 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ALDH6A1Q02252 535 aaKnown RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ZNF267Q14586 743 aaPredicted RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 LY6KQ17RY6 165 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 GJC2Q5T442 439 aaPredicted RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 RGMBQ6NW40 437 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 CHPFQ8IZ52 775 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ATPAF2Q8N5M1 289 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 OR8H1Q8NGG4 311 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 SETD6Q8TBK2 473 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 APH1BQ8WW43 257 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 FRMD6Q96NE9 622 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 CCDC115Q96NT0 180 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 C1QTNF7Q9BXJ2 289 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 DYRK4Q9NR20 520 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 DIABLOQ9NR28 239 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 GPR83Q9NYM4 423 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 TAS2R16Q9NYV7 291 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 GLTPQ9NZD2 209 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 HSPE1-MOB4S4R3N1 261 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 A0A0B4J293 547 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 PTHP01270 115 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 PDGFAP04085 211 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 HOXA9P31269 272 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 RGS6P49758 472 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 GEMP55040 296 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 HOXC5Q00444 222 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 SNTA1Q13424 505 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 NR6A1Q15406 480 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 C5orf22Q49AR2 442 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 KIAA1841Q6NSI8 718 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ENTHD1Q8IYW4 607 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 CAMKK1Q8N5S9 505 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 OR8J3Q8NGG0 315 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 RNF34Q969K3 372 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 RNF31Q96EP0 1072 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 MRGPRX2Q96LB1 330 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 FCRL5Q96RD9 977 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ATOH8Q96SQ7 321 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 FDXACB1Q9BRP7 624 aaPredicted RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 TTPALQ9BTX7 342 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 PRKD2Q9BZL6 878 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ACTL8Q9H568 366 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 RBM22Q9NW64 420 aaKnown RBP eCLIP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 MIOSQ9NXC5 875 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 NUP50Q9UKX7 468 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 FAM50BQ9Y247 325 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 NEUROG3Q9Y4Z2 214 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 KCTD3Q9Y597 815 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 DNMT3AQ9Y6K1 912 aaPredicted RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 COL16A1Q07092 1604 aaPredicted RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ZBTB42B2RXF5 422 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 SEC22BO75396 215 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 WDR47O94967 919 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 SCELO95171 688 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 MLYCDO95822 493 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ITGB1P05556 798 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 TRAPPC2P0DI81 140 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 TRAPPC2BP0DI82 140 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 UROSP10746 265 aa12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 ARF4P18085 180 aaPredicted RBP12.08□□□□□ -0.48
SCAMP2-204ENST00000563829 SCNN1AP37088 669 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms