RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	TRPV1	Q8NER1	839 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	OR4N2	Q8NGD1	307 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	MPLKIP	Q8TAP9	179 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC35F5	Q8WV83	523 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM170A	Q8WVE7	144 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TEKT4	Q8WW24	435 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	WASF1	Q92558	559 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SGCD	Q92629	289 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC25A28	Q96A46	364 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	DEFB118	Q96PH6	123 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	PIP5K1A	Q99755	562 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	THUMPD3	Q9BV44	507 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	POLDIP3	Q9BY77	421 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	KRT23	Q9C075	422 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CDT1	Q9H211	546 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	NDST4	Q9H3R1	872 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	C17orf75	Q9HAS0	396 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC38A10	Q9HBR0	1119 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	BPIFA1	Q9NP55	256 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	POLE3	Q9NRF9	147 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	HOMER3	Q9NSC5	361 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	ATAD3A	Q9NVI7	634 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	COQ3	Q9NZJ6	369 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	HSPB7	Q9UBY9	170 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	A4GNT	Q9UNA3	340 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	WDR37	Q9Y2I8	494 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	RIPK3	Q9Y572	518 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	PSAT1	Q9Y617	370 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	ASTN1	O14525	1302 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PFAS	O15067	1338 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CGB1	A6NKQ9	187 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF814	B7Z6K7	855 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PTGES3L	E9PB15	166 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431		H0YAE9	185 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431		H0YGN5	161 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431		H0YIV9	168 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	HIP1	O00291	1037 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431		O00370	1275 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	EBAG9	O00559	213 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PGRMC2	O15173	223 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	RANBP6	O60518	1105 aa	Known RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	SEC31A	O94979	1220 aa	Known RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	SMC2	O95347	1197 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	GCNT3	O95395	438 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC25A27	O95847	323 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	KLKB1	P03952	638 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CLEC3B	P05452	202 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	S100A6	P06703	90 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PGK2	P07205	417 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ASGR1	P07306	291 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM191B	P0C7N4	346 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	SNHG28	P0DPA3	235 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PRF1	P14222	555 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CTPS1	P17812	591 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CCNA2	P20248	432 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	GDI1	P31150	447 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PPARG	P37231	505 aa	Predicted RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PSMB10	P40306	273 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ARCN1	P48444	511 aa	Known RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	STAT2	P52630	851 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ACTR1A	P61163	376 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	RUNX1T1	Q06455	604 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	GABPB1	Q06547	395 aa	Predicted RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	RPA4	Q13156	261 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CAMK2D	Q13557	499 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	TDRD12	Q587J7	1177 aa	Known RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	HSP90AA5P	Q58FG0	334 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	WASHC2D	Q5SRD0	308 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	SNRNP48	Q6IEG0	339 aa	Known RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM154	Q6P9G4	183 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZYG11A	Q6WRX3	759 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	COLCA1	Q6ZS62	124 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	STOX1	Q6ZVD7	989 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PIM3	Q86V86	326 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	GPSM1	Q86YR5	675 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	DENND6A	Q8IWF6	608 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	MMP21	Q8N119	569 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	MRPL43	Q8N983	215 aa	Known RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	BBOF1	Q8ND07	529 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	GJC3	Q8NFK1	279 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	KIF18A	Q8NI77	898 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ACMSD	Q8TDX5	336 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	WIPF2	Q8TF74	440 aa	Predicted RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	COQ8B	Q96D53	544 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	NR1H4	Q96RI1	486 aa	Predicted RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	SH3GL1	Q99961	368 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	GAL3ST1	Q99999	423 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	TUBA1C	Q9BQE3	449 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM47	Q9BQJ4	181 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CCDC106	Q9BWC9	280 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	SPRTN	Q9H040	489 aa	Predicted RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ISCU	Q9H1K1	167 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	CATSPERB	Q9H7T0	1116 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	MRPL44	Q9H9J2	332 aa	Known RBP	4.05	□□□□□ -1.76

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