RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CRADDP78560 199 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 TPSAB1Q15661 275 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 KYNUQ16719 465 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 TLDC1Q6P9B6 456 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 OTOAQ7RTW8 1153 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 LDB1Q86U70 411 aaPredicted RBP17.14■□□□□ 0.33
TPM1-218ENST00000559281 TRIM73Q86UV7 250 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 DCUN1D3Q8IWE4 304 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 RAB42Q8N4Z0 105 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 OTUD6BQ8N6M0 293 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 DHRS4Q9BTZ2 278 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 KIFC1Q9BW19 673 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 ING2Q9H160 280 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 EPN3Q9H201 632 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 FAM60AQ9NP50 221 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 IRAK4Q9NWZ3 460 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 MARCH4Q9P2E8 410 aaPredicted RBP17.14■□□□□ 0.33
TPM1-218ENST00000559281 SLC39A10Q9ULF5 831 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 PLAGL1Q9UM63 463 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 CDYLQ9Y232 598 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 PADI2Q9Y2J8 665 aa17.14■□□□□ 0.33
TPM1-218ENST00000559281 VAPBO95292 243 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 PAMP19021 973 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 CD9P21926 228 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 RPS3P23396 243 aaKnown RBP eCLIP17.13■□□□□ 0.33
TPM1-218ENST00000559281 MGAT1P26572 445 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 NMBRP28336 390 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 PKLRP30613 574 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 CCZ1BP86790 482 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 CCZ1P86791 482 aaPredicted RBP17.13■□□□□ 0.33
TPM1-218ENST00000559281 PTCHD3Q3KNS1 767 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 RNF187Q5TA31 235 aaPredicted RBP17.13■□□□□ 0.33
TPM1-218ENST00000559281 LCN10Q6JVE6 187 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 VRK3Q8IV63 474 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 KRT222Q8N1A0 295 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 FOPNLQ96NB1 174 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 TCF12Q99081 682 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 NAP1L3Q99457 506 aaPredicted RBP17.13■□□□□ 0.33
TPM1-218ENST00000559281 RAB11FIP5Q9BXF6 653 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 P2RY12Q9H244 342 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 INTS7Q9NVH2 962 aaKnown RBP17.13■□□□□ 0.33
TPM1-218ENST00000559281 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.13■□□□□ 0.33
TPM1-218ENST00000559281 G3BP2Q9UN86 482 aaKnown RBP17.13■□□□□ 0.33
TPM1-218ENST00000559281 SRPK3Q9UPE1 567 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 JRKLQ9Y4A0 524 aa17.13■□□□□ 0.33
TPM1-218ENST00000559281 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.12■□□□□ 0.33
TPM1-218ENST00000559281 H3BMM5 538 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 S1PR4O95977 384 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 CCL11P51671 97 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 IL10RAQ13651 578 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 NCF4Q15080 339 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 ZIC1Q15915 447 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 RHBDD2Q6NTF9 364 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 PRELID2Q8N945 189 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 FLVCR1-AS1Q8TAF5 88 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 PROKR1Q8TCW9 393 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 LKAAEAR1Q8TD35 194 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 DENND1AQ8TEH3 1009 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 SKA2Q8WVK7 121 aaPredicted RBP17.12■□□□□ 0.33
TPM1-218ENST00000559281 RAD51AP1Q96B01 352 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 MFSD3Q96ES6 412 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 PBKQ96KB5 322 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 SLC25A23Q9BV35 468 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 TXLNGQ9NUQ3 528 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 GPN3Q9UHW5 284 aaPredicted RBP17.12■□□□□ 0.33
TPM1-218ENST00000559281 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
TPM1-218ENST00000559281 SOX13Q9UN79 622 aa17.12■□□□□ 0.33
TPM1-218ENST00000559281 MAGEB16A2A368 324 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 ARGFXA6NJG6 315 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 ZSCAN9O15535 394 aaPredicted RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 FKBP9O95302 570 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 CAPN1P07384 714 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 CCNFP41002 786 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 RRADP55042 308 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 EIF3BP55884 814 aaKnown RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 DCDP81605 110 aaKnown RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 GPS1Q13098 491 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 TRIP13Q15645 432 aaPredicted RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 CASC4Q6P4E1 433 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 MED25Q71SY5 747 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 DNAJC22Q8N4W6 341 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 TMEM102Q8N9M5 508 aaPredicted RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 OR2L8Q8NGY9 312 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 ADAMTS17Q8TE56 1095 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 MAGOHBQ96A72 148 aaKnown RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 IP6K3Q96PC2 410 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 NDC1Q9BTX1 674 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 SPRTNQ9H040 489 aaPredicted RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 SYBUQ9NX95 663 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 SAMD15Q9P1V8 674 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 VPS9D1Q9Y2B5 631 aa17.11■□□□□ 0.33
TPM1-218ENST00000559281 PCDHGA9Q9Y5G4 932 aaKnown RBP17.11■□□□□ 0.33
TPM1-218ENST00000559281 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 DNAJB5O75953 348 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 TMEM63AO94886 807 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 KRT14P02533 472 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 NR1D1P20393 614 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 GABRA4P48169 554 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms