RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TDRKHQ9Y2W6 561 aaKnown RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 LOXL2Q9Y4K0 774 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 DMXL2Q8TDJ6 3036 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 CHD8Q9HCK8 2581 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 IGF2RP11717 2491 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 CCDC187A0A096LP49 1063 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 A8MU76 341 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 CDRT15L2A8MXV6 281 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 EIF3FO00303 357 aaPredicted RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 RASGRF2O14827 1237 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 HCRTR1O43613 425 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 NRP2O60462 931 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 BRINP1O60477 761 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 DXOO77932 396 aaKnown RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 ITGA2BP08514 1039 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 ABHD2P08910 425 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 SLC35E2BP0CK96 405 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 CBSLP0DN79 551 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 ENO3P13929 434 aaPredicted RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 PVRP15151 417 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 UGT2B7P16662 529 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 AMD1P17707 334 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 PSMB5P28074 263 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 CBSP35520 551 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 SKIV2L2P42285 1042 aaKnown RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 RAB28P51157 221 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 PMS2P54278 862 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 SH3BP2P78314 561 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 GABREP78334 506 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 NAB1Q13506 487 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 TRA2AQ13595 282 aaKnown RBP eCLIP11.07□□□□□ -0.643e-6■■□□□ 12.9
SNX1-204ENST00000559061 ZIC1Q15915 447 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 CYP2A13Q16696 494 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 PPP1R3AQ16821 1122 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 ERCC6LQ2NKX8 1250 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 SNAP47Q5SQN1 464 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 IRGCQ6NXR0 463 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 CTAGE3PQ8IX95 158 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 C2orf73Q8N5S3 287 aaPredicted RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 FBXO15Q8NCQ5 510 aaPredicted RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 AENQ8WTP8 325 aaKnown RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 SLC44A1Q8WWI5 657 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 AHCYL2Q96HN2 611 aaKnown RBP11.07□□□□□ -0.64
SNX1-204ENST00000559061 SLC41A2Q96JW4 573 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 SRMSQ9H3Y6 488 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 SYNPO2LQ9H987 977 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 NSMCE4AQ9NXX6 385 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 ACTR10Q9NZ32 417 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 PDE10AQ9Y233 779 aa11.07□□□□□ -0.64
SNX1-204ENST00000559061 FER1L5A0AVI2 2057 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 C9orf172C9J069 976 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 CDC7O00311 574 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 HGSO14964 777 aaPredicted RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 TLX3O43711 291 aaPredicted RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 ALDOAP04075 364 aaKnown RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 SHBGP04278 402 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 ST6GAL1P15907 406 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 SAT1P21673 171 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 PRDX3P30048 256 aaKnown RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 SHMT2P34897 504 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 MAGEA12P43365 314 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 GABRA4P48169 554 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 POU4F1Q01851 419 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 CYP4F3Q08477 520 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 KRT33BQ14525 404 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 KCNAB1Q14722 419 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 TTLL9Q3SXZ7 439 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 GRTP1Q5TC63 336 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 IGF2-ASQ6U949 168 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 UNQ6494/PRO21346Q6UXR6 183 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 TRMT10CQ7L0Y3 403 aaKnown RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 RAB11FIP2Q7L804 512 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 TAX1BP1Q86VP1 789 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 OOSP2Q86WS3 158 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 PLXDC1Q8IUK5 500 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 SPATA6LQ8N4H0 392 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 OR2L8Q8NGY9 312 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 HMGCLL1Q8TB92 370 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 CDKL2Q92772 493 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 ISL2Q96A47 359 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 PTERQ96BW5 349 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 GRAMD1AQ96CP6 724 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 MRRFQ96E11 262 aaKnown RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 PDLIM5Q96HC4 596 aaKnown RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 UBXN10Q96LJ8 280 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 CYTH2Q99418 400 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 PAFAH2Q99487 392 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 DPYSL5Q9BPU6 564 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 UNKQ9C0B0 810 aaKnown RBP11.06□□□□□ -0.64
SNX1-204ENST00000559061 KLHL25Q9H0H3 589 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 POLR1BQ9H9Y6 1135 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 POPDC3Q9HBV1 291 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 APMAPQ9HDC9 416 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 OR6C2Q9NZP2 312 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 FOXJ2Q9P0K8 574 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 POLG2Q9UHN1 485 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 SH2B3Q9UQQ2 575 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 PCDHGA8Q9Y5G5 932 aa11.06□□□□□ -0.64
SNX1-204ENST00000559061 HEATR5BQ9P2D3 2071 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms