RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 PSMA3P25788 255 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 PTPN4P29074 926 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 PRDX3P30048 256 aaKnown RBP8.78□□□□□ -1
SDR39U1-207ENST00000553937 FOXN2P32314 431 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 NPY2RP49146 381 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 PMS2P54278 862 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 RPS15P62841 145 aaKnown RBP8.78□□□□□ -1
SDR39U1-207ENST00000553937 GSTM4Q03013 218 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 CKAP4Q07065 602 aaKnown RBP8.78□□□□□ -1
SDR39U1-207ENST00000553937 DHX9Q08211 1270 aaKnown RBP8.78□□□□□ -1
SDR39U1-207ENST00000553937 PRKG2Q13237 762 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 IL10RAQ13651 578 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 LAMB3Q13751 1172 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 DHX34Q14147 1143 aaKnown RBP8.78□□□□□ -1
SDR39U1-207ENST00000553937 SEMA3AQ14563 771 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 ITIH4Q14624 930 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 BRD3Q15059 726 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 UGT8Q16880 541 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 ZNF789Q5FWF6 425 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 PACS1Q6VY07 963 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 NAPRTQ6XQN6 538 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 ZNF517Q6ZMY9 492 aaPredicted RBP8.78□□□□□ -1
SDR39U1-207ENST00000553937 SYVN1Q86TM6 617 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 AMIGO1Q86WK6 493 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 ADGRF3Q8IZF5 1079 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 OR5AR1Q8NGP9 310 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 OR8K5Q8NH50 307 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 OR1L3Q8NH93 324 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 ELMO1Q92556 727 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 TFGQ92734 400 aaPredicted RBP8.78□□□□□ -1
SDR39U1-207ENST00000553937 CLIP3Q96DZ5 547 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 SNF8Q96H20 258 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 RANBP9Q96S59 729 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 CARD6Q9BX69 1037 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 GPR87Q9BY21 358 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 TRIM55Q9BYV6 548 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 PITPNM3Q9BZ71 974 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 KLHL25Q9H0H3 589 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 CHST8Q9H2A9 424 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 TLK1Q9UKI8 766 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 ICKQ9UPZ9 632 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 SHANK1Q9Y566 2161 aa8.78□□□□□ -1
SDR39U1-207ENST00000553937 MAST4O15021 2626 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 PRRC2CQ9Y520 2896 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SDR42E2A6NKP2 422 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 C2orf74A8MZ97 194 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 KIF2AO00139 706 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 QSOX1O00391 747 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 LIN7AO14910 233 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 OR1I1O60431 355 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SEC31AO94979 1220 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 VAPBO95292 243 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 FTH1P02794 183 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 KLK3P07288 261 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ARNTP27540 789 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ACADLP28330 430 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 RORAP35398 523 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 PRAMEP78395 509 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SARNPP82979 210 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 CDK16Q00536 496 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 KLRB1Q12918 225 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 CHAF1BQ13112 559 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 FASTKD3Q14CZ7 662 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SYTL3Q4VX76 610 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 PLEKHS1Q5SXH7 462 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 CPZQ66K79 652 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 LCN10Q6JVE6 187 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 TCTN3Q6NUS6 607 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 HIBCHQ6NVY1 386 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SPESP1Q6UW49 350 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 CDHR3Q6ZTQ4 885 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SYDE1Q6ZW31 735 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ZNF572Q7Z3I7 529 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 TRIM73Q86UV7 250 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ANKMY2Q8IV38 441 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 APLFQ8IW19 511 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 DSELQ8IZU8 1212 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 OTUD6BQ8N6M0 293 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ENDOVQ8N8Q3 282 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 MCUQ8NE86 351 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SEC14L1Q92503 715 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ZNF669Q96BR6 464 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 CFAP36Q96G28 342 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SIGLEC10Q96LC7 697 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 LRFN5Q96NI6 719 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 RUNDC3BQ96NL0 473 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 TRAPPC9Q96Q05 1148 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 WDR83Q9BRX9 315 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ERP44Q9BS26 406 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 IL22Q9GZX6 179 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ACTR5Q9H9F9 607 aaPredicted RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SYTL2Q9HCH5 934 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 XAB2Q9HCS7 855 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 PCMTD2Q9NV79 361 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ACTR10Q9NZ32 417 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SLC17A6Q9P2U8 582 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 SOX13Q9UN79 622 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 FARSAQ9Y285 508 aaKnown RBP8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 ASF1AQ9Y294 204 aa8.77□□□□□ -1.01
SDR39U1-207ENST00000553937 TDRKHQ9Y2W6 561 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 256.6 ms