RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CPOXP36551 454 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 PRAMEF9Q5VWM5 478 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 OGFOD2Q6N063 350 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 C1orf21Q9H246 121 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 RMI1Q9H9A7 625 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 MRGBPQ9NV56 204 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 KLHL33A6NCF5 533 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 GSC2O15499 205 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 LATO43561 262 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 RASSF9O75901 435 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 CLDN9O95484 217 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 HOXC4P09017 264 aaPredicted RBP19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 LBPP18428 481 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 MNAT1P51948 309 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 CLDN2P57739 230 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 DMPKQ09013 629 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 PTK2BQ14289 1009 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 SQLEQ14534 574 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 ABRAXAS2Q15018 415 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 C10orf67Q8IYJ2 551 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 OR56A3Q8NH54 315 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 SCARF2Q96GP6 870 aaPredicted RBP19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 UHRF1Q96T88 793 aaPredicted RBP19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 PFDN4Q9NQP4 134 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 PRDM6Q9NQX0 595 aa19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 ZFC3H1O60293 1989 aaKnown RBP19.02■□□□□ 0.64
RBFOX1-215ENST00000553186 THRAP10827 490 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 ZP2Q05996 745 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 NAE1Q13564 534 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 HABP4Q5JVS0 413 aaKnown RBP19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 IL27RAQ6UWB1 636 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 UNC5DQ6UXZ4 953 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 RNF165Q6ZSG1 346 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 LONP2Q86WA8 852 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 ADHFE1Q8IWW8 467 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 SNX31Q8N9S9 440 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 RP9Q8TA86 221 aaKnown RBP19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 ZNF480Q8WV37 535 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 BMFQ96LC9 184 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 HBEGFQ99075 208 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 ACTR8Q9H981 624 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 MRPL40Q9NQ50 206 aaKnown RBP19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 WNT16Q9UBV4 365 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 CCL27Q9Y4X3 112 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 COL6A3P12111 3177 aa19.02■□□□□ 0.63
RBFOX1-215ENST00000553186 CACNB4O00305 520 aaPredicted RBP19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 PEX11AO75192 247 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 SEMA4FO95754 770 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 HMOX2P30519 316 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 ATP4BP51164 291 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 STARD6P59095 220 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 HERC3Q15034 1050 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 GGTA1PQ4G0N0 100 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 PYCR3Q53H96 274 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 ANO7Q6IWH7 933 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 CHST15Q7LFX5 561 aaPredicted RBP19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 THOC6Q86W42 341 aaKnown RBP19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 SNX32Q86XE0 403 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 PGBD3Q8N328 593 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 L3MBTL4Q8NA19 623 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 RAB3IPQ96QF0 476 aaPredicted RBP19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 OR4K3Q96R72 315 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 EBF2Q9HAK2 575 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 LTB4R2Q9NPC1 389 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 SUFUQ9UMX1 484 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 CA5BQ9Y2D0 317 aa19.01■□□□□ 0.63
RBFOX1-215ENST00000553186 KCNE1BA0A087WTH5 132 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 PRR19A6NJB7 356 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 MEI4A8MW99 385 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 H0Y8X5 98 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 FFAR3O14843 346 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 GPR42O15529 346 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 ACP5P13686 325 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 HNRNPA2B1P22626 353 aaKnown RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 ELF3P78545 371 aaPredicted RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 LRRC32Q14392 662 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 PPFIBP2Q8ND30 876 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 OR9A1PQ8NGU1 263 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 TFGQ92734 400 aaPredicted RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 USP7Q93009 1102 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 TIMM29Q9BSF4 260 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 SLC29A3Q9BZD2 475 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 FGF22Q9HCT0 170 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 FARSBQ9NSD9 589 aaKnown RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 PSMD13Q9UNM6 376 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 ASF1AQ9Y294 204 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 PSMD12O00232 456 aaPredicted RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 WFS1O76024 890 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 KIAA1024LP59773 190 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 CYLC2Q14093 348 aaPredicted RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 MYLK4Q86YV6 388 aaPredicted RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 SFRP1Q8N474 314 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 RIC8BQ9NVN3 520 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 KLQ9UEF7 1012 aa19■□□□□ 0.63
RBFOX1-215ENST00000553186 MRPS17Q9Y2R5 130 aaKnown RBP19■□□□□ 0.63
RBFOX1-215ENST00000553186 KANSL1LA0AUZ9 987 aa18.99■□□□□ 0.63
RBFOX1-215ENST00000553186 FPGTO14772 594 aa18.99■□□□□ 0.63
RBFOX1-215ENST00000553186 GPX3P22352 226 aa18.99■□□□□ 0.63
RBFOX1-215ENST00000553186 RPL10P27635 214 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms