RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 FPGSQ05932 587 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 CYP24A1Q07973 514 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 CDH17Q12864 832 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TRAF3Q13114 568 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 GRK1Q15835 563 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 CA9Q16790 459 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 MICAQ29983 383 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ALFQ53S48 1182 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ZMAT1Q5H9K5 638 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 SFRP5Q5T4F7 317 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TSTD2Q5T7W7 516 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 GPR158Q5T848 1215 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TYW3Q6IPR3 259 aaKnown RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 LIPIQ6XZB0 460 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 PLEKHM3Q6ZWE6 761 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 LARP4Q71RC2 724 aaKnown RBP eCLIP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 SLC46A3Q7Z3Q1 461 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 KRT77Q7Z794 578 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 DTX1Q86Y01 620 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 SPPL2CQ8IUH8 684 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TMEM192Q8IY95 271 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 MICU2Q8IYU8 434 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ADGRF4Q8IZF3 695 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ZNF444Q8N0Y2 327 aaPredicted RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 LRRC47Q8N1G4 583 aaKnown RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 GHDCQ8N2G8 530 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 PQLC3Q8N755 202 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 PAF1Q8N7H5 531 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 CCNYL1Q8N7R7 359 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TTLL6Q8N841 843 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 YIPF7Q8N8F6 280 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 C19orf47Q8N9M1 422 aaKnown RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ZBTB44Q8NCP5 570 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 VANGL1Q8TAA9 524 aaPredicted RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 MAGEE2Q8TD90 523 aaPredicted RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 SETD7Q8WTS6 366 aaKnown RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 RNF141Q8WVD5 230 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 POMGNT1Q8WZA1 660 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ATOH1Q92858 354 aaPredicted RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ISG20Q96AZ6 181 aaKnown RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TOX2Q96NM4 488 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 MCCC1Q96RQ3 725 aaPredicted RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 GAD1Q99259 594 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 CPNE1Q99829 537 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 NAT9Q9BTE0 207 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 DGCR6LQ9BY27 220 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ZNF518BQ9C0D4 1074 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 NUAK2Q9H093 628 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 GABARAPL1Q9H0R8 117 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 GHITMQ9H3K2 345 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 FAM83DQ9H4H8 585 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ZCCHC4Q9H5U6 513 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 C3orf14Q9HBI5 128 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 ACOT13Q9NPJ3 140 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TMEM45AQ9NWC5 275 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 PTTG3PQ9NZH4 202 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 TMEFF2Q9UIK5 374 aaPredicted RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 LYVE1Q9Y5Y7 322 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 PSAT1Q9Y617 370 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 OAS3Q9Y6K5 1087 aaKnown RBP5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 STON1Q9Y6Q2 735 aa5.19□□□□□ -1.58
LSM3P2-201ENST00000551246 EFCAB10A6NFE3 127 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 MROH6A6NGR9 719 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 A8MV72 311 aaPredicted RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 EFCAB9A8MZ26 197 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 TISP43B9A030 160 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 K7ERI5 159 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 BTN3A1O00481 513 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 TFECO14948 347 aaPredicted RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 GATCO43716 136 aaKnown RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 DLX3O60479 287 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 TULP3O75386 442 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 METTL18O95568 372 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 TRUB2O95900 331 aaKnown RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 ASS1P00966 412 aaKnown RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 FOSP01100 380 aaPredicted RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 HLA-DQB1P01920 261 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 MT-ND2P03891 347 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 C4BPAP04003 597 aaKnown RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 RAF1P04049 648 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 PRNPP04156 253 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 CTPS1P17812 591 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 IL1RNP18510 177 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 PGAM1P18669 254 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 HDCP19113 662 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 ZP3P21754 424 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 KRT20P35900 424 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 PIGAP37287 484 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 MAP2K4P45985 399 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 CCR10P46092 362 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 GYG1P46976 350 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 ARHGDIAP52565 204 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 BLVRAP53004 296 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 SNAP25P60880 206 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 IL1RL1Q01638 556 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 RELQ04864 619 aaPredicted RBP5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 GABPAQ06546 454 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 SCRN3Q0VDG4 424 aa5.18□□□□□ -1.58
LSM3P2-201ENST00000551246 GRIK2Q13002 908 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms