RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 CD9P21926 228 aa11□□□□□ -0.65
BEST3-209ENST00000548658 MGAT1P26572 445 aa11□□□□□ -0.65
BEST3-209ENST00000548658 NMBRP28336 390 aa11□□□□□ -0.65
BEST3-209ENST00000548658 RORAP35398 523 aa11□□□□□ -0.65
BEST3-209ENST00000548658 CSE1LP55060 971 aaKnown RBP11□□□□□ -0.65
BEST3-209ENST00000548658 KCNC4Q03721 635 aa11□□□□□ -0.65
BEST3-209ENST00000548658 ABRQ12979 859 aa11□□□□□ -0.65
BEST3-209ENST00000548658 GPS2Q13227 327 aa11□□□□□ -0.65
BEST3-209ENST00000548658 SEMA3AQ14563 771 aa11□□□□□ -0.65
BEST3-209ENST00000548658 KCNJ11Q14654 390 aa11□□□□□ -0.65
BEST3-209ENST00000548658 CYP1B1Q16678 543 aa11□□□□□ -0.65
BEST3-209ENST00000548658 KYNUQ16719 465 aa11□□□□□ -0.65
BEST3-209ENST00000548658 PLEKHS1Q5SXH7 462 aa11□□□□□ -0.65
BEST3-209ENST00000548658 TCTN3Q6NUS6 607 aa11□□□□□ -0.65
BEST3-209ENST00000548658 CASC4Q6P4E1 433 aa11□□□□□ -0.65
BEST3-209ENST00000548658 TLDC1Q6P9B6 456 aa11□□□□□ -0.65
BEST3-209ENST00000548658 FAM199XQ6PEV8 388 aaPredicted RBP11□□□□□ -0.65
BEST3-209ENST00000548658 NAPRTQ6XQN6 538 aa11□□□□□ -0.65
BEST3-209ENST00000548658 CDHR3Q6ZTQ4 885 aa11□□□□□ -0.65
BEST3-209ENST00000548658 MICALCLQ6ZW33 695 aa11□□□□□ -0.65
BEST3-209ENST00000548658 LDB1Q86U70 411 aaPredicted RBP11□□□□□ -0.65
BEST3-209ENST00000548658 C19orf47Q8N9M1 422 aaKnown RBP11□□□□□ -0.65
BEST3-209ENST00000548658 SLC38A9Q8NBW4 561 aa11□□□□□ -0.65
BEST3-209ENST00000548658 MCUQ8NE86 351 aa11□□□□□ -0.65
BEST3-209ENST00000548658 OR1L3Q8NH93 324 aa11□□□□□ -0.65
BEST3-209ENST00000548658 GRK7Q8WTQ7 553 aa11□□□□□ -0.65
BEST3-209ENST00000548658 MFSD3Q96ES6 412 aa11□□□□□ -0.65
BEST3-209ENST00000548658 DHRS4Q9BTZ2 278 aa11□□□□□ -0.65
BEST3-209ENST00000548658 CHST8Q9H2A9 424 aa11□□□□□ -0.65
BEST3-209ENST00000548658 AKIRIN1Q9H9L7 192 aaPredicted RBP11□□□□□ -0.65
BEST3-209ENST00000548658 INTS7Q9NVH2 962 aaKnown RBP11□□□□□ -0.65
BEST3-209ENST00000548658 SYBUQ9NX95 663 aa11□□□□□ -0.65
BEST3-209ENST00000548658 MARCH4Q9P2E8 410 aaPredicted RBP11□□□□□ -0.65
BEST3-209ENST00000548658 SLC39A10Q9ULF5 831 aa11□□□□□ -0.65
BEST3-209ENST00000548658 SNX7Q9UNH6 387 aa11□□□□□ -0.65
BEST3-209ENST00000548658 CDYLQ9Y232 598 aa11□□□□□ -0.65
BEST3-209ENST00000548658 MAN2B2Q9Y2E5 1009 aa11□□□□□ -0.65
BEST3-209ENST00000548658 PADI2Q9Y2J8 665 aa11□□□□□ -0.65
BEST3-209ENST00000548658 SPTA1P02549 2419 aa11□□□□□ -0.65
BEST3-209ENST00000548658 HELZ2Q9BYK8 2649 aaKnown RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 CFAP46Q8IYW2 2715 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 FAM237BA0A1B0GVD1 139 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 IQCF5A8MTL0 148 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 C9J4A7 227 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 PGRMC1O00264 195 aaKnown RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 CES2O00748 559 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 ZNF749O43361 778 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 KIF5CO60282 957 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 RFPL1O75677 317 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 TPBGLP0DKB5 382 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 PVRP15151 417 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 OGNP20774 298 aaKnown RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 COILP38432 576 aaPredicted RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 CCNFP41002 786 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 CSRP3P50461 194 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 PMS2P54278 862 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 EIF3BP55884 814 aaKnown RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 TRIP13Q15645 432 aaPredicted RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 TYSND1Q2T9J0 566 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 LACTB2Q53H82 288 aaPredicted RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 ZNF789Q5FWF6 425 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 ATP1A1-AS1Q5TC04 95 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 KIAA0930Q6ICG6 404 aaPredicted RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 CCDC137Q6PK04 289 aaKnown RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 VRK3Q8IV63 474 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 LMNTD2Q8IXW0 634 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 SYTL1Q8IYJ3 562 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 KRT222Q8N1A0 295 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 CFAP61Q8NHU2 1237 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 PROKR1Q8TCW9 393 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 ACTRT1Q8TDG2 376 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 SKA2Q8WVK7 121 aaPredicted RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 ANP32BQ92688 251 aaKnown RBP10.99□□□□□ -0.65
BEST3-209ENST00000548658 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 KLHL25Q9H0H3 589 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 GRPEL1Q9HAV7 217 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 PCMTD2Q9NV79 361 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 SPHK1Q9NYA1 384 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 TCFL5Q9UL49 500 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 SRPK3Q9UPE1 567 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 PLCL2Q9UPR0 1127 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 SEC16AO15027 2179 aa10.99□□□□□ -0.65
BEST3-209ENST00000548658 BOD1L1Q8NFC6 3051 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 TCRBV7S3A2A0A539 114 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 RASGRF2O14827 1237 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 WISP1O95388 367 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 FURINP09958 794 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 CHRM3P20309 590 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 ARNTP27540 789 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 ATP5DP30049 168 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 PKLRP30613 574 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 FNTAP49354 379 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 VPS41P49754 854 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 SF1Q15637 639 aaKnown RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 ZC3H12BQ5HYM0 836 aaKnown RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 PRAMEF17Q5VTA0 474 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 RHBDD2Q6NTF9 364 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 NEPROQ6NW34 567 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 ENDOVQ8N8Q3 282 aaKnown RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 OR2L8Q8NGY9 312 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms