RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	SLC35E4	Q6ICL7	350 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	FTSJ3	Q8IY81	847 aa	Known RBP	3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	CADM4	Q8NFZ8	388 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	RUFY2	Q8WXA3	655 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	MRPS27	Q92552	414 aa	Known RBP	3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	SH3KBP1	Q96B97	665 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	FBXL8	Q96CD0	374 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	C17orf77	Q96MU5	243 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	TBC1D17	Q9HA65	648 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	MAGEE1	Q9HCI5	957 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	PAG1	Q9NWQ8	432 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	LUZP4	Q9P127	313 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZNF69	Q9UC07	566 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	STK39	Q9UEW8	545 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	LSM4	Q9Y4Z0	139 aa	Known RBP	3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	DDX49	Q9Y6V7	483 aa	Known RBP	3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	LOXHD1	Q8IVV2	1947 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	ABCB11	O95342	1321 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	DNAH14	Q0VDD8	3507 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	DENND4A	Q7Z401	1863 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	OBSCN	Q5VST9	7968 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	EIF4E1B	A6NMX2	242 aa	Known RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	KRTAP16-1	A8MUX0	517 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	TIMM44	O43615	452 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	PRDM1	O75626	825 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	STAM2	O75886	525 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	GGPS1	O95749	300 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	LGALS2	P05162	132 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZFY	P08048	801 aa	Predicted RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	TOP1	P11387	765 aa	Known RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	CA8	P35219	290 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	DCT	P40126	519 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	EFNA5	P52803	228 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	GNB1	P62873	340 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	PDE1B	Q01064	536 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	POU5F1	Q01860	360 aa	Known RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	BIRC3	Q13489	604 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	TAF5	Q15542	800 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	SLC45A4	Q5BKX6	768 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	SPECC1	Q5M775	1068 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	RARS2	Q5T160	578 aa	Known RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	TRNP1	Q6NT89	227 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	CYP26C1	Q6V0L0	522 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	RAD9B	Q6WBX8	426 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	DHX40	Q8IX18	779 aa	Known RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	PLD5	Q8N7P1	536 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	VN1R2	Q8NFZ6	395 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	HMGCLL1	Q8TB92	370 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	RSPH1	Q8WYR4	309 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZNF354B	Q96LW1	612 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	MTERF1	Q99551	399 aa	Known RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	C16orf70	Q9BSU1	422 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	HEMGN	Q9BXL5	484 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	MMP25	Q9NPA2	562 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	ALKBH4	Q9NXW9	302 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	SUFU	Q9UMX1	484 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	MRPL11	Q9Y3B7	192 aa	Known RBP	3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	DMXL1	Q9Y485	3027 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	VPS13A	Q96RL7	3174 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	CFAP47	Q6ZTR5	3102 aa		3.41	□□□□□ -1.86
RPAP3-205	ENST00000548211	HMMR	O75330	724 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	CHRNA1	P02708	482 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	DCN	P07585	359 aa	Known RBP	3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	RET	P07949	1114 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	DMD	P11532	3685 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	CCND2	P30279	289 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	CHKA	P35790	457 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	NT5C2	P49902	561 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	LIMK1	P53667	647 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	SNAP25	P60880	206 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	MRPS6	P82932	125 aa	Known RBP	3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	CSTF1	Q05048	431 aa	Known RBP	3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	GTF2H2	Q13888	395 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	PTPN14	Q15678	1187 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	LETM2	Q2VYF4	491 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	HSDL1	Q3SXM5	330 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	USH1G	Q495M9	461 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	FBXO47	Q5MNV8	452 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	GTF2H2C	Q6P1K8	395 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	DCLRE1A	Q6PJP8	1040 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	METTL7B	Q6UX53	244 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	C15orf39	Q6ZRI6	1047 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	MMS22L	Q6ZRQ5	1243 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	SLC24A5	Q71RS6	500 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	TDRP	Q86YL5	185 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	LRRC43	Q8N309	656 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	MYCT1	Q8N699	235 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	MRPL43	Q8N983	215 aa	Known RBP	3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	COLGALT1	Q8NBJ5	622 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	ZBTB44	Q8NCP5	570 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	MAGEC3	Q8TD91	643 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	KIF1BP	Q96EK5	621 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	ST6GAL2	Q96JF0	529 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	COG8	Q96MW5	612 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	ZNF558	Q96NG5	402 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	KLHL5	Q96PQ7	755 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	BBS4	Q96RK4	519 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	CD180	Q99467	661 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	EGFL8	Q99944	293 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	NAPB	Q9H115	298 aa		3.4	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms