RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, human

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC4-216	ENST00000544989	GPR135	Q8IZ08	494 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	PDIK1L	Q8N165	341 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	GALNT6	Q8NCL4	622 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	SKA2	Q8WVK7	121 aa	Predicted RBP	11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	KCNJ9	Q92806	393 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	ZNF501	Q96CX3	271 aa	Predicted RBP	11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	LRRC39	Q96DD0	335 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	ELMO2	Q96JJ3	720 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	CAPZA3	Q96KX2	299 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	SIGLEC10	Q96LC7	697 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	LRFN5	Q96NI6	719 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	TRAPPC9	Q96Q05	1148 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	DPH2	Q9BQC3	489 aa	Predicted RBP	11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	SLC12A9	Q9BXP2	914 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	GPR87	Q9BY21	358 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	XKR8	Q9H6D3	395 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	LHX9	Q9NQ69	397 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	SLC39A10	Q9ULF5	831 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	PYCARD	Q9ULZ3	195 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	PCDHGA6	Q9Y5G7	932 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	FAM169A	Q9Y6X4	670 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	UBR5	O95071	2799 aa	Predicted RBP	11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	TEX15	Q9BXT5	2789 aa		11.43	□□□□□ -0.58
HDAC4-216	ENST00000544989	FLNC	Q14315	2725 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	LOC101059948	A0A1B0GTJ6	334 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	ZNF839	A8K0R7	811 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	TMEM150C	B9EJG8	249 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	GOLGA8K	D6RF30	607 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	GOLGA8T	H3BQL2	631 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	EIF3F	O00303	357 aa	Predicted RBP	11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	RASGRF2	O14827	1237 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	SCRG1	O75711	98 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	KLK3	P07288	261 aa	Predicted RBP	11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	UGT2B7	P16662	529 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	DLST	P36957	453 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	HSD17B2	P37059	387 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	ABR	Q12979	859 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	SPANXN3	Q5MJ09	141 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	CTSL3P	Q5NE16	218 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	KIAA1614	Q5VZ46	1190 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	IZUMO3	Q5VZ72	239 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	LRRC8E	Q6NSJ5	796 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	PWWP2B	Q6NUJ5	590 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	UGT3A1	Q6NUS8	523 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	BORA	Q6PGQ7	559 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	NAPRT	Q6XQN6	538 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	MICALCL	Q6ZW33	695 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	NEK10	Q6ZWH5	1172 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	CENPU	Q71F23	418 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	KLHL7	Q8IXQ5	586 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	KRT222	Q8N1A0	295 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	ZBTB2	Q8N680	514 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	C19orf47	Q8N9M1	422 aa	Known RBP	11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	BBOF1	Q8ND07	529 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	OR2L8	Q8NGY9	312 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	CFAP61	Q8NHU2	1237 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	LKAAEAR1	Q8TD35	194 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	DENND1A	Q8TEH3	1009 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	MED8	Q96G25	268 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	OR2A14	Q96R47	310 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	EBNA1BP2	Q99848	306 aa	Known RBP	11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	TWSG1	Q9GZX9	223 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	FAM114A2	Q9NRY5	505 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	SPATA7	Q9P0W8	599 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	CRYL1	Q9Y2S2	319 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	AP1M2	Q9Y6Q5	423 aa		11.42	□□□□□ -0.58
HDAC4-216	ENST00000544989	CYSRT1	A8MQ03	144 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ISM1	B1AKI9	464 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989		E7EQ34	232 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	CD63	P08962	238 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	CBSL	P0DN79	551 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ENO3	P13929	434 aa	Predicted RBP	11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ST6GAL1	P15907	406 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ZNF28	P17035	718 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	TCN2	P20062	427 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	CYP2A7	P20853	494 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	CD9	P21926	228 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	CBS	P35520	551 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	PTGIR	P43119	386 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ITGA1	P56199	1179 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ARL4C	P56559	192 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	RPS15	P62841	145 aa	Known RBP	11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ILF2	Q12905	390 aa	Known RBP	11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	SRSF6	Q13247	344 aa	Known RBP	11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	GBX1	Q14549	363 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	CRYM	Q14894	314 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	GPR19	Q15760	415 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	KIAA0408	Q6ZU52	694 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	MAATS1	Q7Z4T9	603 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	GALNT7	Q86SF2	657 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	KCNMB4	Q86W47	210 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	VRK3	Q8IV63	474 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	HMGCLL1	Q8TB92	370 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	STARD8	Q92502	1023 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	SNF8	Q96H20	258 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	C17orf62	Q9BQA9	187 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	SLC7A5P2	Q9GIP4	190 aa		11.41	□□□□□ -0.58
HDAC4-216	ENST00000544989	ADNP	Q9H2P0	1102 aa		11.41	□□□□□ -0.58

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