RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 HPS6Q86YV9 775 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 GLIS1Q8NBF1 620 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 PANX3Q96QZ0 392 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 SLC25A23Q9BV35 468 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 RAB11FIP5Q9BXF6 653 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 ING2Q9H160 280 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 MRM3Q9HC36 420 aaKnown RBP15.09■□□□□ 0.01
VPS33A-206ENST00000542310 TREX1Q9NSU2 369 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 SPHK1Q9NYA1 384 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 GNPTGQ9UJJ9 305 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 CDYLQ9Y232 598 aa15.09■□□□□ 0.01
VPS33A-206ENST00000542310 ANKRD12Q6UB98 2062 aa15.08■□□□□ 0.01
VPS33A-206ENST00000542310 ARGFXA6NJG6 315 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 K7EM74 188 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 ZSCAN9O15535 394 aaPredicted RBP15.08■□□□□ 0
VPS33A-206ENST00000542310 OR2B3O76000 313 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 TMEM63AO94886 807 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 SLCO2B1O94956 709 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 FKBP9O95302 570 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 CD63P08962 238 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 RPS3P23396 243 aaKnown RBP eCLIP15.08■□□□□ 0
VPS33A-206ENST00000542310 PEBP1P30086 187 aaKnown RBP15.08■□□□□ 0
VPS33A-206ENST00000542310 RPL22P35268 128 aaKnown RBP15.08■□□□□ 0
VPS33A-206ENST00000542310 CDK16Q00536 496 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 ZIC1Q15915 447 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 KYNUQ16719 465 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 PTCHD3Q3KNS1 767 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 TLDC1Q6P9B6 456 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 MED25Q71SY5 747 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 PRUNE1Q86TP1 453 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 TRIM73Q86UV7 250 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 RAB43Q86YS6 212 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 TMEM102Q8N9M5 508 aaPredicted RBP15.08■□□□□ 0
VPS33A-206ENST00000542310 TRIM58Q8NG06 486 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 LKAAEAR1Q8TD35 194 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 MIB2Q96AX9 1013 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 SLC22A18Q96BI1 424 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 IP6K3Q96PC2 410 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 MENTQ9BUN1 341 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 KLHL25Q9H0H3 589 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 FAM60AQ9NP50 221 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 HOMER3Q9NSC5 361 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 G3BP2Q9UN86 482 aaKnown RBP15.08■□□□□ 0
VPS33A-206ENST00000542310 MRFAP1Q9Y605 127 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 DOPEY2Q9Y3R5 2298 aa15.08■□□□□ 0
VPS33A-206ENST00000542310 KPNA5O15131 536 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 S1PR4O95977 384 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 PDGFAP04085 211 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 ZSCAN5DPP0CG00 497 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 TPSB2P20231 275 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 AOAHP28039 575 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 RRADP55042 308 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 BASP1P80723 227 aaKnown RBP15.07■□□□□ 0
VPS33A-206ENST00000542310 HSPA14Q0VDF9 509 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 TPSAB1Q15661 275 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 NAPRTQ6XQN6 538 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 GBP5Q96PP8 586 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 P2RY12Q9H244 342 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 BFARQ9NZS9 450 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 PLCL2Q9UPR0 1127 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 ZNF451Q9Y4E5 1061 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 CCDC88CQ9P219 2028 aa15.07■□□□□ 0
VPS33A-206ENST00000542310 PCSK5Q92824 1860 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 CLEC18AA5D8T8 446 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 ISM1B1AKI9 464 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 CD3EAPO15446 510 aaKnown RBP15.06■□□□□ 0
VPS33A-206ENST00000542310 FGGP02679 453 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 NPY2RP49146 381 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 SESN2P58004 480 aaPredicted RBP15.06■□□□□ 0
VPS33A-206ENST00000542310 CHAF1BQ13112 559 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 DEFB110Q30KQ9 67 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 RNF187Q5TA31 235 aaPredicted RBP15.06■□□□□ 0
VPS33A-206ENST00000542310 PTRHD1Q6GMV3 140 aaKnown RBP15.06■□□□□ 0
VPS33A-206ENST00000542310 CLEC18BQ6UXF7 455 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 ATCAYQ86WG3 371 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 VRK3Q8IV63 474 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 DNAJC22Q8N4W6 341 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 LINC01555Q8NAE3 123 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 CLEC18CQ8NCF0 446 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 OR2L8Q8NGY9 312 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 DENND1AQ8TEH3 1009 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 DLG3Q92796 817 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 KIFC1Q9BW19 673 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 CHRAC1Q9NRG0 131 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 ENAMQ9NRM1 1142 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 INTS7Q9NVH2 962 aaKnown RBP15.06■□□□□ 0
VPS33A-206ENST00000542310 MARCH4Q9P2E8 410 aaPredicted RBP15.06■□□□□ 0
VPS33A-206ENST00000542310 PLAGL1Q9UM63 463 aa15.06■□□□□ 0
VPS33A-206ENST00000542310 HECTD1Q9ULT8 2610 aa15.05■□□□□ 0
VPS33A-206ENST00000542310 FLNCQ14315 2725 aa15.05■□□□□ 0
VPS33A-206ENST00000542310 RASGRF2O14827 1237 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 IGHEP01854 428 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 CD9P21926 228 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 CSE1LP55060 971 aaKnown RBP15.05■□□□□ -0
VPS33A-206ENST00000542310 DCDP81605 110 aaKnown RBP15.05■□□□□ -0
VPS33A-206ENST00000542310 GRB7Q14451 532 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 TYSND1Q2T9J0 566 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 LRRC8BQ6P9F7 803 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 GSTA5Q7RTV2 222 aa15.05■□□□□ -0
VPS33A-206ENST00000542310 MRGPREQ86SM8 312 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms