RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TRIP13Q15645 432 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-211ENST00000533492 KYNUQ16719 465 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 PTCHD3Q3KNS1 767 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 LCN10Q6JVE6 187 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 LRRC8BQ6P9F7 803 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 ASB18Q6ZVZ8 466 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 SDCCAG8Q86SQ7 713 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-211ENST00000533492 LRRC6Q86X45 466 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 VRK3Q8IV63 474 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 MPP5Q8N3R9 675 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 LKAAEAR1Q8TD35 194 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 SKA2Q8WVK7 121 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-211ENST00000533492 DPH2Q9BQC3 489 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-211ENST00000533492 ACSS2Q9NR19 701 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 TREX1Q9NSU2 369 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 TCFL5Q9UL49 500 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 SLC39A10Q9ULF5 831 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 TTC7AQ9ULT0 858 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-211ENST00000533492 FLNBO75369 2602 aaKnown RBP14.91□□□□□ -0.02
CPSF1-211ENST00000533492 ARGFXA6NJG6 315 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 DNAJB5O75953 348 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 SLCO2B1O94956 709 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 VAPBO95292 243 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 TPSB2P20231 275 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 PKLRP30613 574 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 VPS41P49754 854 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 CCL11P51671 97 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 EIF3BP55884 814 aaKnown RBP14.9□□□□□ -0.02
CPSF1-211ENST00000533492 TPSAB1Q15661 275 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 ZIC1Q15915 447 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 SLC5A12Q1EHB4 618 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 DEFB110Q30KQ9 67 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 MRNIPQ6NTE8 343 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 UNC5DQ6UXZ4 953 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 OTOAQ7RTW8 1153 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 DCUN1D3Q8IWE4 304 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 PRELID2Q8N945 189 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 SLC22A18Q96BI1 424 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 MFSD3Q96ES6 412 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 C17orf62Q9BQA9 187 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 KIFC1Q9BW19 673 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 TRIM55Q9BYV6 548 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 CHRNA10Q9GZZ6 450 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 SPRTNQ9H040 489 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-211ENST00000533492 ING2Q9H160 280 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 MRM3Q9HC36 420 aaKnown RBP14.9□□□□□ -0.02
CPSF1-211ENST00000533492 SYBUQ9NX95 663 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-211ENST00000533492 CDYLQ9Y232 598 aa14.9□□□□□ -0.02
CPSF1-211ENST00000533492 MYO18BQ8IUG5 2567 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 K7EM74 188 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 ATXN8OSP0DMR3 200 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 CD9P21926 228 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 GPS1Q13098 491 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 CHAF1BQ13112 559 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 MLIPQ5VWP3 458 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 TLDC1Q6P9B6 456 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 RAB42Q8N4Z0 105 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 C2orf73Q8N5S3 287 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-211ENST00000533492 FLVCR1-AS1Q8TAF5 88 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 MAGOHBQ96A72 148 aaKnown RBP14.89□□□□□ -0.03
CPSF1-211ENST00000533492 FOPNLQ96NB1 174 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 SLC25A23Q9BV35 468 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 P2RY12Q9H244 342 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 TXLNGQ9NUQ3 528 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 INTS7Q9NVH2 962 aaKnown RBP14.89□□□□□ -0.03
CPSF1-211ENST00000533492 CIDEBQ9UHD4 219 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 GPN3Q9UHW5 284 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-211ENST00000533492 SOX13Q9UN79 622 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 PLCL2Q9UPR0 1127 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 PADI2Q9Y2J8 665 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 MRFAP1Q9Y605 127 aa14.89□□□□□ -0.03
CPSF1-211ENST00000533492 TCRBV7S3A2A0A539 114 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 ZSCAN9O15535 394 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-211ENST00000533492 TMEM63AO94886 807 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 S1PR4O95977 384 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 KRT14P02533 472 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 CAPN1P07384 714 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 PAMP19021 973 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 MAGP20916 626 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 RPS3P23396 243 aaKnown RBP eCLIP14.88□□□□□ -0.03
CPSF1-211ENST00000533492 PEBP1P30086 187 aaKnown RBP14.88□□□□□ -0.03
CPSF1-211ENST00000533492 FMO4P31512 558 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 PTGIRP43119 386 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 NCF4Q15080 339 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 SF1Q15637 639 aaKnown RBP14.88□□□□□ -0.03
CPSF1-211ENST00000533492 KCTD19Q17RG1 926 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-211ENST00000533492 COLEC12Q5KU26 742 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 RNF187Q5TA31 235 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-211ENST00000533492 C1orf189Q5VU69 101 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 FAM69BQ5VUD6 431 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 CPZQ66K79 652 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 RHBDD2Q6NTF9 364 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 CASC4Q6P4E1 433 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 FAM198BQ6UWH4 519 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 TAX1BP1Q86VP1 789 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 FAM20CQ8IXL6 584 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 DNAJC22Q8N4W6 341 aa14.88□□□□□ -0.03
CPSF1-211ENST00000533492 ZNF655Q8N720 491 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms