RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 CISHQ9NSE2 258 aa5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 KIF17Q9P2E2 1029 aa5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 RCOR1Q9UKL0 485 aa5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 CNTN6Q9UQ52 1028 aa5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 HBS1LQ9Y450 684 aaKnown RBP5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 HEMK1Q9Y5R4 338 aaPredicted RBP5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 RPS6KL1Q9Y6S9 549 aa5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
AMBRA1-209ENST00000529963 LOC400499M0QZD8 3231 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 KNL1Q8NG31 2342 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 CABIN1Q9Y6J0 2220 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 LOC105369274A0A096LPK9 316 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 LOC102723532A0A0G2JNH3 316 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 A0A1B0GVL5 298 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 POC1B-GALNT4F8VUJ3 575 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 XPO1O14980 1071 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 TNFSF14O43557 240 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 LATS1O95835 1130 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 DNTTP04053 509 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 PRB1P04280 392 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 ATP5BP06576 529 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 EPB41P11171 864 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 CYP2A6P11509 494 aaPredicted RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 HLA-EP13747 358 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 MMP8P22894 467 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 CMA1P23946 247 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 HOXD9P28356 352 aaPredicted RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 SYKP43405 635 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 CSNK1EP49674 416 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 VPS41P49754 854 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 AGTR2P50052 363 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 MXI1P50539 228 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 PRKAA2P54646 552 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 YWHAEP62258 255 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 MPP1Q00013 466 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 BNC1Q01954 994 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 BST2Q10589 180 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 EFR3AQ14156 821 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 SEC23BQ15437 767 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 SMN1Q16637 294 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 GOLGA7BQ2TAP0 167 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 RAB41Q5JT25 222 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 ATPAF1Q5TC12 328 aaPredicted RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 PM20D1Q6GTS8 502 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 LRRTM4Q86VH4 590 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 OR4N4Q8N0Y3 316 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 SIX6OS1Q8N1H7 587 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 GUF1Q8N442 669 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 GALNT4Q8N4A0 578 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 ZNF557Q8N988 423 aaPredicted RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 ANKRD52Q8NB46 1076 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 SLC4A11Q8NBS3 891 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 FBXL13Q8NEE6 735 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 AKAP1Q92667 903 aaKnown RBP eCLIP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 DPF1Q92782 380 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 IGSF8Q969P0 613 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 C3orf49Q96BT1 292 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 TMA16Q96EY4 203 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 CCDC34Q96HJ3 373 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 REXO5Q96IC2 774 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 C5orf34Q96MH7 638 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 FYTTD1Q96QD9 318 aaKnown RBP5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 EFHD1Q9BUP0 239 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 ULBP1Q9BZM6 244 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 CDCP1Q9H5V8 836 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 SGK2Q9HBY8 427 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 ABCB8Q9NUT2 735 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 RAB20Q9NX57 234 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 SUN2Q9UH99 717 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 CLEC4EQ9ULY5 219 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 COX11Q9Y6N1 276 aa5.16□□□□□ -1.58
AMBRA1-209ENST00000529963 ABCA12Q86UK0 2595 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 ANKRD17O75179 2603 aaKnown RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 GOLGA4Q13439 2230 aaKnown RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 TYW5A2RUC4 315 aaKnown RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 CETN3O15182 167 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 DFNA5O60443 496 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 TSPAN3O60637 253 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 RNASEH1O60930 286 aaKnown RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 PROP1O75360 226 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 SEMA4FO95754 770 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 POLR2EP19388 210 aaKnown RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 CD27P26842 260 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 MPGP29372 298 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 HLA-FP30511 346 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 ACSL1P33121 698 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 KRT9P35527 623 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 ABCG1P45844 678 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 RAD23BP54727 409 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 C21orf59P57076 290 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 NANOS3P60323 173 aaKnown RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 ST8SIA6P61647 398 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 RPS14P62263 151 aaKnown RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 TUBA4AP68366 448 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 SRSF1Q07955 248 aaKnown RBP eCLIP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 PDE1CQ14123 709 aaPredicted RBP5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 RPS6KA2Q15349 733 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 KIF19Q2TAC6 998 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 EDRF1Q3B7T1 1238 aa5.15□□□□□ -1.58
AMBRA1-209ENST00000529963 ZCWPW2Q504Y3 356 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms