RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 WT1P19544 449 aaPredicted RBP8.79□□□□□ -1
CMTM1-210ENST00000528441 OGNP20774 298 aaKnown RBP8.79□□□□□ -1
CMTM1-210ENST00000528441 AGXTP21549 392 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 RAB28P51157 221 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 ITGA1P56199 1179 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 ACVR1Q04771 509 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 KCNJ11Q14654 390 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 SF1Q15637 639 aaKnown RBP8.79□□□□□ -1
CMTM1-210ENST00000528441 BBS9Q3SYG4 887 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 ATP1A1-AS1Q5TC04 95 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 ANKRD22Q5VYY1 191 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 IZUMO3Q5VZ72 239 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 KIAA0930Q6ICG6 404 aaPredicted RBP8.79□□□□□ -1
CMTM1-210ENST00000528441 NEPROQ6NW34 567 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 PPIL6Q8IXY8 311 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 CARFQ8N187 725 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 D2HGDHQ8N465 521 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 OR8K5Q8NH50 307 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 CALML6Q8TD86 181 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 ACTRT1Q8TDG2 376 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 CT55Q8WUE5 264 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 SLC22A18Q96BI1 424 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 WBP1Q96G27 269 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 SERPINB12Q96P63 405 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 IL17FQ96PD4 163 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 RAB11FIP5Q9BXF6 653 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 TRIM31Q9BZY9 425 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 KCNF1Q9H3M0 494 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 SYTL2Q9HCH5 934 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 PRM3Q9NNZ6 103 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 FBXO6Q9NRD1 293 aaPredicted RBP8.79□□□□□ -1
CMTM1-210ENST00000528441 OR6C2Q9NZP2 312 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 IL17BQ9UHF5 180 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 G3BP2Q9UN86 482 aaKnown RBP8.79□□□□□ -1
CMTM1-210ENST00000528441 POLHQ9Y253 713 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 MAN2B2Q9Y2E5 1009 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 COMMD10Q9Y6G5 202 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 CFAP47Q6ZTR5 3102 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 LAMA5O15230 3695 aa8.79□□□□□ -1
CMTM1-210ENST00000528441 ZFHX4Q86UP3 3567 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 MAGEB16A2A368 324 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 OR2B3O76000 313 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 HBQ1P09105 142 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 ERVK-10P10266 1014 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 MLNP12872 115 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 PKMP14618 531 aaKnown RBP8.78□□□□□ -1
CMTM1-210ENST00000528441 POLE2P56282 527 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 KCNC4Q03721 635 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 KIR2DS3Q14952 304 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 LONRF1Q17RB8 773 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 ANKRD20A4Q4UJ75 823 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 PLEKHS1Q5SXH7 462 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 THEMIS2Q5TEJ8 643 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 C1orf189Q5VU69 101 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 MLIPQ5VWP3 458 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 FAM199XQ6PEV8 388 aaPredicted RBP8.78□□□□□ -1
CMTM1-210ENST00000528441 UNC5DQ6UXZ4 953 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 ADCK2Q7Z695 626 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 PTRH1Q86Y79 214 aaKnown RBP8.78□□□□□ -1
CMTM1-210ENST00000528441 VRK3Q8IV63 474 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 PALM2Q8IXS6 379 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 SLC22A15Q8IZD6 547 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 ZBTB2Q8N680 514 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.78□□□□□ -1
CMTM1-210ENST00000528441 APOBEC4Q8WW27 367 aaKnown RBP8.78□□□□□ -1
CMTM1-210ENST00000528441 RAD51AP1Q96B01 352 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 CFAP36Q96G28 342 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 RUNDC3BQ96NL0 473 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 FCRL4Q96PJ5 515 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 TRAPPC9Q96Q05 1148 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 NRTNQ99748 197 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 FAM167BQ9BTA0 163 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 KIFC1Q9BW19 673 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 SLC12A9Q9BXP2 914 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 SEMA4CQ9C0C4 833 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 IARS2Q9NSE4 1012 aaKnown RBP8.78□□□□□ -1
CMTM1-210ENST00000528441 TREX1Q9NSU2 369 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 RUVBL2Q9Y230 463 aaKnown RBP8.78□□□□□ -1
CMTM1-210ENST00000528441 BTRCQ9Y297 605 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 PADI2Q9Y2J8 665 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 SAR1BQ9Y6B6 198 aa8.78□□□□□ -1
CMTM1-210ENST00000528441 DSPP15924 2871 aaKnown RBP8.78□□□□□ -1
CMTM1-210ENST00000528441 ZFYVE26Q68DK2 2539 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 FAM237BA0A1B0GVD1 139 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 USP27XA6NNY8 438 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 C21orf140B9A014 251 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CES2O00748 559 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 DNALI1O14645 258 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 VPS26AO75436 327 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CREG1O75629 220 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 USP1O94782 785 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ESR1P03372 595 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CATP04040 527 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 F7P08709 466 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 MAGP20916 626 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ALAS2P22557 587 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 RPS3P23396 243 aaKnown RBP eCLIP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 AOAHP28039 575 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ACADLP28330 430 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 OAS2P29728 719 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms