RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RPL22P35268 128 aaKnown RBP13.71□□□□□ -0.21
CAPN1-212ENST00000527887 RAB28P51157 221 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 RPS18P62269 152 aaKnown RBP13.71□□□□□ -0.21
CAPN1-212ENST00000527887 SNX1Q13596 522 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 BRD3Q15059 726 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 KYNUQ16719 465 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 TLDC1Q6P9B6 456 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 TTC23LQ6PF05 361 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 UNC5DQ6UXZ4 953 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 MED25Q71SY5 747 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 ENDOVQ8N8Q3 282 aaKnown RBP13.71□□□□□ -0.21
CAPN1-212ENST00000527887 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-212ENST00000527887 PROKR1Q8TCW9 393 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 ADAMTS17Q8TE56 1095 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 DENND1AQ8TEH3 1009 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 ZNF778Q96MU6 729 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 PANX3Q96QZ0 392 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 RUFY1Q96T51 708 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 ING2Q9H160 280 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 MLXIPLQ9NP71 852 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 ACSS2Q9NR19 701 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 CATSPERZQ9NTU4 200 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 SRPK3Q9UPE1 567 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 TDRKHQ9Y2W6 561 aaKnown RBP13.71□□□□□ -0.21
CAPN1-212ENST00000527887 SAR1BQ9Y6B6 198 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 H3BMH7 237 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 PFDN6O15212 129 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 CD3EAPO15446 510 aaKnown RBP13.7□□□□□ -0.22
CAPN1-212ENST00000527887 OR2B3O76000 313 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 SLCO2B1O94956 709 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 FKBP9O95302 570 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 IGHEP01854 428 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 CAPN1P07384 714 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 ETS1P14921 441 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 PVRP15151 417 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 RRADP55042 308 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 HSPA14Q0VDF9 509 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 IL10RAQ13651 578 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 NCF4Q15080 339 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 TMED2Q15363 201 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 SIX1Q15475 284 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-212ENST00000527887 WHAMMP3Q1A5X7 153 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 PRAMEF17Q5VTA0 474 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 RHBDD2Q6NTF9 364 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 GSTA5Q7RTV2 222 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 DCUN1D3Q8IWE4 304 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 FLVCR1-AS1Q8TAF5 88 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 SLC25A23Q9BV35 468 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 MRM3Q9HC36 420 aaKnown RBP13.7□□□□□ -0.22
CAPN1-212ENST00000527887 CHRAC1Q9NRG0 131 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 GNPTGQ9UJJ9 305 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 PLCL2Q9UPR0 1127 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
CAPN1-212ENST00000527887 ISM1B1AKI9 464 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 KLHL41O60662 606 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 CEACAM4O75871 244 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 TMEM63AO94886 807 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 S1PR4O95977 384 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 FGGP02679 453 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 ZSCAN5DPP0CG00 497 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 TPBGLP0DKB5 382 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 AOAHP28039 575 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 PKLRP30613 574 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 GABRA4P48169 554 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 PGDP52209 483 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 SARNPP82979 210 aaKnown RBP13.69□□□□□ -0.22
CAPN1-212ENST00000527887 ZNF385CQ66K41 422 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-212ENST00000527887 PTRHD1Q6GMV3 140 aaKnown RBP13.69□□□□□ -0.22
CAPN1-212ENST00000527887 MRNIPQ6NTE8 343 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 LRRC8BQ6P9F7 803 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 FAM198BQ6UWH4 519 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 SDCCAG8Q86SQ7 713 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-212ENST00000527887 RAB43Q86YS6 212 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 DNAJC22Q8N4W6 341 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 GLIS1Q8NBF1 620 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 MYRIPQ8NFW9 859 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 NACC2Q96BF6 587 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 TCF12Q99081 682 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 RAB11FIP5Q9BXF6 653 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 KLHL25Q9H0H3 589 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 FAM60AQ9NP50 221 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 TREX1Q9NSU2 369 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 INTS7Q9NVH2 962 aaKnown RBP13.69□□□□□ -0.22
CAPN1-212ENST00000527887 SPHK1Q9NYA1 384 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 ZNF451Q9Y4E5 1061 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 HECTD1Q9ULT8 2610 aa13.69□□□□□ -0.22
CAPN1-212ENST00000527887 ARGFXA6NJG6 315 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 H3BMM5 538 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 ZSCAN9O15535 394 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-212ENST00000527887 NDUFS3O75489 264 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 TPSB2P20231 275 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 CD9P21926 228 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 RPS3P23396 243 aaKnown RBP eCLIP13.68□□□□□ -0.22
CAPN1-212ENST00000527887 CD97P48960 835 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 CCL11P51671 97 aa13.68□□□□□ -0.22
CAPN1-212ENST00000527887 SESN2P58004 480 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-212ENST00000527887 BASP1P80723 227 aaKnown RBP13.68□□□□□ -0.22
CAPN1-212ENST00000527887 DCDP81605 110 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms