RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RPA1P27694 616 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 CD1CP29017 333 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 PRKAR1BP31321 381 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 DGKQP52824 942 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 RPS21P63220 83 aaKnown RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 BIRC3Q13489 604 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 NR1D2Q14995 579 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 CALCRLQ16602 461 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 PTCHD3Q3KNS1 767 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 EFHC1Q5JVL4 640 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 CES4AQ5XG92 561 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ICE2Q659A1 982 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ARL6IP4Q66PJ3 421 aaKnown RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 PLEKHA7Q6IQ23 1121 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ARMC6Q6NXE6 501 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 C16orf47Q6ZP98 133 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 NCCRP1Q6ZVX7 275 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ZSCAN30Q86W11 494 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 OR8D1Q8WZ84 308 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 TRAPPC9Q96Q05 1148 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 CDK5RAP1Q96SZ6 601 aaKnown RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 KLF6Q99612 283 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ZNF559Q9BR84 538 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 ACTL8Q9H568 366 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 SLCO3A1Q9UIG8 710 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 SERTAD3Q9UJW9 196 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 STOML2Q9UJZ1 356 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 SCML2Q9UQR0 700 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 HPSEQ9Y251 543 aa6.84□□□□□ -1.31
NEDD8-203ENST00000524927 MDC1Q14676 2089 aaKnown RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 NCOA6Q14686 2063 aaPredicted RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 KLF18A0A0U1RQI7 1052 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 CLDN5O00501 218 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 POLR1CO15160 346 aaPredicted RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 PHF1O43189 567 aaPredicted RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 KLHL41O60662 606 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 CDKL5O76039 1030 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 SLPIP03973 132 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ALPPP05187 535 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 HMBSP08397 361 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 FAM163BP0C2L3 166 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 IGFBP2P18065 325 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 GATA3P23771 443 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ALDH4A1P30038 563 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 PPIFP30405 207 aaKnown RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 NNMTP40261 264 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 GARSP41250 739 aaKnown RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 CA7P43166 264 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ACOT2P49753 483 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 VAV2P52735 878 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 OR1D5P58170 312 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 YPEL5P62699 121 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 RBP5P82980 135 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ADORA2A-AS1P86434 159 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ECT2LQ008S8 904 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 OTUD4Q01804 1114 aaKnown RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 GALNT1Q10472 559 aaPredicted RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 MAPK7Q13164 816 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 CDSNQ15517 529 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 MAPKAPK3Q16644 382 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM95Q3KNT9 176 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 RAP1GAP2Q684P5 730 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 KIAA1161Q6NSJ0 714 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 MZT2AQ6P582 158 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 MACC1Q6ZN28 852 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 KIAA0408Q6ZU52 694 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 SYVN1Q86TM6 617 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ACOT1Q86TX2 421 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 KRT73Q86Y46 540 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 CCDC28AQ8IWP9 274 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ULK2Q8IYT8 1036 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 DENND6BQ8NEG7 585 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 WFDC5Q8TCV5 224 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 STYXQ8WUJ0 223 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 CACTINQ8WUQ7 758 aaKnown RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM171Q8WVE6 324 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 TM9SF4Q92544 642 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 SORCS2Q96PQ0 1159 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 PRPF18Q99633 342 aaKnown RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ULBP3Q9BZM4 244 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 NMUR1Q9HB89 426 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ZBTB26Q9HCK0 441 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 INTS13Q9NVM9 706 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 PDP2Q9P2J9 529 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 ITGA11Q9UKX5 1188 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 INTS6Q9UL03 887 aaKnown RBP6.83□□□□□ -1.32
NEDD8-203ENST00000524927 PLEKHA6Q9Y2H5 1048 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 PCDHGB3Q9Y5G1 929 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 TRPM6Q9BX84 2022 aa6.83□□□□□ -1.32
NEDD8-203ENST00000524927 SVEP1Q4LDE5 3571 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 H0YCG3 227 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 OVOL3O00110 214 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 PCDH17O14917 1159 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 MCF2LO15068 1137 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 RALAP11233 206 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 EGR1P18146 543 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 GNL1P36915 607 aaPredicted RBP6.82□□□□□ -1.32
NEDD8-203ENST00000524927 TSFMP43897 325 aaKnown RBP6.82□□□□□ -1.32
NEDD8-203ENST00000524927 RENBPP51606 427 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms