RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 EBPLQ9BY08 206 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 ADAMTS10Q9H324 1103 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 GDAP2Q9NXN4 497 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAPRE3Q9UPY8 281 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC27A6Q9Y2P4 619 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 KCTD3Q9Y597 815 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZBTB42B2RXF5 422 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC28A2O43868 658 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAT2AP31153 395 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 CSKP41240 450 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 EEFSECP57772 596 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 SKP1P63208 163 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 C2orf80Q0P641 193 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 BIKQ13323 160 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 GRB14Q14449 540 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 HACD2Q6Y1H2 254 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 UXS1Q8NBZ7 420 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR52J3Q8NH60 311 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 VANGL1Q8TAA9 524 aaPredicted RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZHX1-C8orf76Q96EF9 292 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC2A13Q96QE2 648 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 RBM4BQ9BQ04 359 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 RBM4Q9BWF3 364 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 FBP2O00757 339 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC31A1O15431 190 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 NDUFS2O75306 463 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 CNTN5O94779 1100 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 FADS2O95864 444 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 UROSP10746 265 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 CDH1P12830 882 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 RPL3P39023 403 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 MTAPQ13126 283 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 BHLHB9Q6PI77 547 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR10A6Q8NH74 314 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 HTRA1Q92743 480 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 C16orf70Q9BSU1 422 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 LRRC3Q9BY71 257 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 SERHL2Q9H4I8 314 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 SERHLQ9NQF3 203 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 OLAHQ9NV23 265 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 ARMC1Q9NVT9 282 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 TMEM181Q9P2C4 612 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 GMPR2Q9P2T1 348 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 QSER1Q2KHR3 1735 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 RAP2AP10114 183 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 DIO3P55073 304 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 UFM1P61960 85 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ECT2LQ008S8 904 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 DMPKQ09013 629 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 STX4Q12846 297 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PTPRCAPQ14761 206 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 FAM174BQ3ZCQ3 159 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF57Q68EA5 555 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 TMEM220Q6QAJ8 160 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PNPLA1Q8N8W4 532 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 KLK6Q92876 244 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 RERGQ96A58 199 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 HEPHQ9BQS7 1158 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 OSBPL2Q9H1P3 480 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 RPF2Q9H7B2 306 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 DUS2Q9NX74 493 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 MRPS7Q9Y2R9 242 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 POLR1DQ9Y2S0 133 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 TNS1Q9HBL0 1735 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 SIPA1L1O43166 1804 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 KIAA0100Q14667 2235 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 A0A1W2PP18 115 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PIRO00625 290 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 BCKDKO14874 412 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 AURKAO14965 403 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ATE1O95260 518 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ITGA2P17301 1181 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 FOXM1Q08050 763 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 MSANTD2Q6P1R3 559 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 SH3RF2Q8TEC5 729 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 FNDC11Q9BVV2 318 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PHPT1Q9NRX4 125 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 IGSF5Q9NSI5 407 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAP4K5Q9Y4K4 846 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ELOVL7A1L3X0 281 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 TSC22D2O75157 780 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 SERPINB7O75635 380 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 IL6P05231 212 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PTPN2P17706 415 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PPP1R8Q12972 351 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 KRR1Q13601 381 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 TAF1AQ15573 450 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 UNC50Q53HI1 259 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ANXA8L1Q5VT79 327 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 TRIQKQ629K1 86 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC2A7Q6PXP3 512 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF655Q8N720 491 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 GALPQ9UBC7 116 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 SRRDQ9UH36 339 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PNMA8CA0A1B0GUJ8 204 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 LRRC14BA6NHZ5 514 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ANGPTL1O95841 491 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PRNPP04156 253 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAGEA12P43365 314 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms