RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 IQCF5A8MTL0 148 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 RPS18P62269 152 aaKnown RBP17.06■□□□□ 0.32
SIL1-215ENST00000515008 KCNJ11Q14654 390 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 PRAMEF17Q5VTA0 474 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 KIAA0930Q6ICG6 404 aaPredicted RBP17.06■□□□□ 0.32
SIL1-215ENST00000515008 FAM198BQ6UWH4 519 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 SDCCAG8Q86SQ7 713 aaPredicted RBP17.06■□□□□ 0.32
SIL1-215ENST00000515008 TRIM73Q86UV7 250 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 VRK3Q8IV63 474 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 OTUD6BQ8N6M0 293 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 GSDMBQ8TAX9 411 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 SLC22A18Q96BI1 424 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 TCF12Q99081 682 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 C17orf62Q9BQA9 187 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 KLHL25Q9H0H3 589 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 ZNF71Q9NQZ8 489 aaPredicted RBP17.06■□□□□ 0.32
SIL1-215ENST00000515008 MYO18BQ8IUG5 2567 aa17.06■□□□□ 0.32
SIL1-215ENST00000515008 ISM1B1AKI9 464 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 C9J4A7 227 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 H3BMM5 538 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 VAPBO95292 243 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 FKBP9O95302 570 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 PAMP19021 973 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 ARNTP27540 789 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 PEBP1P30086 187 aaKnown RBP17.05■□□□□ 0.32
SIL1-215ENST00000515008 CASRP41180 1078 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 GABRA4P48169 554 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 KCNC4Q03721 635 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 GPS1Q13098 491 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 IL10RAQ13651 578 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 ZIC1Q15915 447 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 TYSND1Q2T9J0 566 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 OTOAQ7RTW8 1153 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 TMEM135Q86UB9 458 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 PTRH1Q86Y79 214 aaKnown RBP17.05■□□□□ 0.32
SIL1-215ENST00000515008 KRT222Q8N1A0 295 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 ENDOVQ8N8Q3 282 aaKnown RBP17.05■□□□□ 0.32
SIL1-215ENST00000515008 PROKR1Q8TCW9 393 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 MFSD3Q96ES6 412 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 DHRS4Q9BTZ2 278 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 MENTQ9BUN1 341 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 TRIM4Q9C037 500 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 FAM60AQ9NP50 221 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 PLAGL1Q9UM63 463 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 SNX7Q9UNH6 387 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 SRPK3Q9UPE1 567 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 TP53TG5Q9Y2B4 290 aa17.05■□□□□ 0.32
SIL1-215ENST00000515008 TCRBV7S3A2A0A539 114 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 ZNF749O43361 778 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 OR2B3O76000 313 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 S1PR4O95977 384 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 KRT14P02533 472 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 MLNP12872 115 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 OGNP20774 298 aaKnown RBP17.04■□□□□ 0.32
SIL1-215ENST00000515008 AGXTP21549 392 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 ADARP55265 1226 aaKnown RBP17.04■□□□□ 0.32
SIL1-215ENST00000515008 EIF3BP55884 814 aaKnown RBP17.04■□□□□ 0.32
SIL1-215ENST00000515008 NCF4Q15080 339 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 CYP1B1Q16678 543 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 ZNF385CQ66K41 422 aaPredicted RBP17.04■□□□□ 0.32
SIL1-215ENST00000515008 RHBDD2Q6NTF9 364 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 TTC23LQ6PF05 361 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 OR2L8Q8NGY9 312 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 MAGOHBQ96A72 148 aaKnown RBP17.04■□□□□ 0.32
SIL1-215ENST00000515008 INTS7Q9NVH2 962 aaKnown RBP17.04■□□□□ 0.32
SIL1-215ENST00000515008 TCFL5Q9UL49 500 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 VPS9D1Q9Y2B5 631 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 PADI2Q9Y2J8 665 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 FER1L5A0AVI2 2057 aa17.04■□□□□ 0.32
SIL1-215ENST00000515008 FLNBO75369 2602 aaKnown RBP17.03■□□□□ 0.32
SIL1-215ENST00000515008 TENM4Q6N022 2769 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 H3BMH7 237 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 PGRMC1O00264 195 aaKnown RBP17.03■□□□□ 0.32
SIL1-215ENST00000515008 RASGRF2O14827 1237 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 ZSCAN9O15535 394 aaPredicted RBP17.03■□□□□ 0.32
SIL1-215ENST00000515008 ESR1P03372 595 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 CAPN1P07384 714 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 CD9P21926 228 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 ATP5DP30049 168 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 CCNFP41002 786 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 VPS41P49754 854 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 TLE1Q04724 770 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 KLRB1Q12918 225 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 GRB7Q14451 532 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 TRIP13Q15645 432 aaPredicted RBP17.03■□□□□ 0.32
SIL1-215ENST00000515008 DEFB110Q30KQ9 67 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 PTCHD3Q3KNS1 767 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 CTSL3PQ5NE16 218 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 LCN10Q6JVE6 187 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 TTC27Q6P3X3 843 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 TLDC1Q6P9B6 456 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 DNAJC22Q8N4W6 341 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 RAB42Q8N4Z0 105 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 LINC01555Q8NAE3 123 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 MCUQ8NE86 351 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 CFAP61Q8NHU2 1237 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 ADAMTS17Q8TE56 1095 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 LPGAT1Q92604 370 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 RAD51AP1Q96B01 352 aa17.03■□□□□ 0.32
SIL1-215ENST00000515008 FOPNLQ96NB1 174 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms