RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ROBO4Q8WZ75 1007 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 SPSB1Q96BD6 273 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 FEVQ99581 238 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 RHNO1Q9BSD3 238 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 BICC1Q9H694 974 aaKnown RBP4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 FAM118AQ9NWS6 357 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 COQ3Q9NZJ6 369 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 DAPK2Q9UIK4 370 aa4.72□□□□□ -1.65
HMGCS1-207ENST00000514610 A0A087WYN8 130 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 DNM1LO00429 736 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 CIDEAO60543 219 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 PENKP01210 267 aaPredicted RBP4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 QDPRP09417 244 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 FRMD6-AS1P0C7T7 363 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 HSPA8P11142 646 aaKnown RBP4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 HOXB6P17509 224 aaKnown RBP4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 CA4P22748 312 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 JAK1P23458 1154 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 PTGER4P35408 488 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 LHX1P48742 406 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 PDX1P52945 283 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 ZNF273Q14593 569 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 ITPRIPL2Q3MIP1 535 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 FAM133BQ5BKY9 247 aaKnown RBP4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 IL27RAQ6UWB1 636 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 PPP1R21Q6ZMI0 780 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 FAM47EQ6ZV65 393 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 CUZD1Q86UP6 607 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 TICAM2Q86XR7 235 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 TTC30BQ8N4P2 665 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 ANKRD13CQ8N6S4 541 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 MAPKAPK5-AS1Q8N8E1 139 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 BMPERQ8N8U9 685 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 TM9SF4Q92544 642 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 MOB3AQ96BX8 217 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 ZNF524Q96C55 264 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 FNBP1Q96RU3 617 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 LAT2Q9GZY6 243 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 FZD8Q9H461 694 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 CHCHD3Q9NX63 227 aaKnown RBP4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 STK26Q9P289 416 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 CPSF3Q9UKF6 684 aaKnown RBP4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 NOTCH4Q99466 2003 aa4.71□□□□□ -1.66
HMGCS1-207ENST00000514610 A0A1W2PPK0 400 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 ERVV-2B6SEH9 535 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 PLOD2O00469 737 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 CSN3P07498 182 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 GLULP15104 373 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 NPY4RP50391 375 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 KRTAP10-9P60411 292 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 PHEXP78562 749 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 MZT1Q08AG7 82 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 PSMD6Q15008 389 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 UGP2Q16851 508 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 UGT3A2Q3SY77 523 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 SPECC1Q5M775 1068 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 SLC27A1Q6PCB7 646 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 TRAT1Q6PIZ9 186 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 RBMS3Q6XE24 437 aaKnown RBP4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 TRPT1Q86TN4 253 aaKnown RBP4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 VSIG1Q86XK7 387 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 MFN1Q8IWA4 741 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 DCUN1D3Q8IWE4 304 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 STPG4Q8N801 248 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 THAP8Q8NA92 274 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 CCDC107Q8WV48 283 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 SIPA1Q96FS4 1042 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 UHRF2Q96PU4 802 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 EDEM3Q9BZQ6 932 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 SDR39U1Q9NRG7 319 aaPredicted RBP4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 GKN1Q9NS71 199 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 ZDHHC2Q9UIJ5 367 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 ANAPC5Q9UJX4 755 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 TMED3Q9Y3Q3 217 aa4.7□□□□□ -1.66
HMGCS1-207ENST00000514610 SMCHD1A6NHR9 2005 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 LOC101059948A0A1B0GTJ6 334 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 CLDN4O14493 209 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 AP5Z1O43299 807 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 PIGNO95427 931 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 HSPA4P34932 840 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 ASCL1P50553 236 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 UBASH3AP57075 661 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 CUL3Q13618 768 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 ITGA7Q13683 1181 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 KRTAP24-1Q3LI83 254 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 ERN2Q76MJ5 926 aaKnown RBP4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 TRMT1LQ7Z2T5 733 aaKnown RBP4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 TLK2Q86UE8 772 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 ZNF383Q8NA42 475 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 EXT2Q93063 718 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 FAM20AQ96MK3 541 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 PGLYRP2Q96PD5 576 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 RAD9AQ99638 391 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 EPYCQ99645 322 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 ZNF624Q9P2J8 865 aaPredicted RBP4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 CACNG4Q9UBN1 327 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 RIPK3Q9Y572 518 aa4.69□□□□□ -1.66
HMGCS1-207ENST00000514610 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
HMGCS1-207ENST00000514610 CCDC188H7C350 402 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms