RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CRTC3Q6UUV7 619 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 XKR5Q6UX68 686 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 HACD2Q6Y1H2 254 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 BNC2Q6ZN30 1099 aaPredicted RBP21.43■■□□□ 1.02
PTPN13-205ENST00000502971 RIPOR1Q6ZS17 1223 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 C11orf96Q7Z7L8 435 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 TP53I13Q8NBR0 393 aaPredicted RBP21.43■■□□□ 1.02
PTPN13-205ENST00000502971 STMN2Q93045 179 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 ATG10Q9H0Y0 220 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 CD248Q9HCU0 757 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 STOX2Q9P2F5 926 aaPredicted RBP21.43■■□□□ 1.02
PTPN13-205ENST00000502971 NDUFAF1Q9Y375 327 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 CCL27Q9Y4X3 112 aa21.43■■□□□ 1.02
PTPN13-205ENST00000502971 COL6A3P12111 3177 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 UGDHO60701 494 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 C1orf105O95561 183 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 TRIM23P36406 574 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 RPA4Q13156 261 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 IRF4Q15306 451 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 NR6A1Q15406 480 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 MAP7D1Q3KQU3 841 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 AGTRAPQ6RW13 159 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 LRRTM4Q86VH4 590 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 OR14C36Q8NHC7 312 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 MAFAQ8NHW3 353 aaPredicted RBP21.42■■□□□ 1.02
PTPN13-205ENST00000502971 PYCR2Q96C36 320 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 PKP4Q99569 1192 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 C1QTNF7Q9BXJ2 289 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 MBNL1Q9NR56 388 aaKnown RBP21.42■■□□□ 1.02
PTPN13-205ENST00000502971 ZIM2Q9NZV7 527 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 ZNF490Q9ULM2 529 aaPredicted RBP21.42■■□□□ 1.02
PTPN13-205ENST00000502971 SNX6Q9UNH7 406 aa21.42■■□□□ 1.02
PTPN13-205ENST00000502971 PRUNE2Q8WUY3 3088 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 KLHL33A6NCF5 533 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 FFAR3O14843 346 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 GPR42O15529 346 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 PAK4O96013 591 aaPredicted RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 FGL2Q14314 439 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 INPP5AQ14642 412 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 TMEM259Q4ZIN3 620 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 DOK6Q6PKX4 331 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 AMZ2Q86W34 360 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 MYLK4Q86YV6 388 aaPredicted RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 PCYOX1LQ8NBM8 494 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 MSANTD3Q96H12 275 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 WDR26Q9H7D7 661 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 PREBQ9HCU5 417 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 FZD4Q9ULV1 537 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 KCNE1BA0A087WTH5 132 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 A0A1W2PQU0 124 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 MRASO14807 208 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 RNGTTO60942 597 aaKnown RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 PDE5AO76074 875 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 ITPKAP23677 461 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 ADPRHP54922 357 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 NME5P56597 212 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 SFSWAPQ12872 951 aaKnown RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 MAD2L1Q13257 205 aaPredicted RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 AP5B1Q2VPB7 878 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 FBXO43Q4G163 708 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 COQ5Q5HYK3 327 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 BLOC1S3Q6QNY0 202 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 USP30Q70CQ3 517 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 KBTBD6Q86V97 674 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 THOC6Q86W42 341 aaKnown RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 OXR1Q8N573 874 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 OR56A3Q8NH54 315 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 ROPN1LQ96C74 230 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 CDRT15Q96T59 188 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 LGR4Q9BXB1 951 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 SLC17A9Q9BYT1 436 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 PHPT1Q9NRX4 125 aaPredicted RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 NOP53Q9NZM5 478 aaKnown RBP21.41■■□□□ 1.02
PTPN13-205ENST00000502971 NCKAP1Q9Y2A7 1128 aa21.41■■□□□ 1.02
PTPN13-205ENST00000502971 TRPM6Q9BX84 2022 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 NR5A2O00482 541 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 SLC22A3O75751 556 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 PSMG1O95456 288 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 ACADLP28330 430 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 IMPA1P29218 277 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 PSME3P61289 254 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 PCDH1Q08174 1060 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 NFE2L1Q14494 772 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 CCSMST1Q4G0I0 132 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 LIPJQ5W064 366 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 UNC5DQ6UXZ4 953 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 FOXJ1Q92949 421 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 SIPA1Q96FS4 1042 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 C1orf50Q9BV19 199 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 SLC6A17Q9H1V8 727 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 ZNHIT2Q9UHR6 403 aa21.4■■□□□ 1.02
PTPN13-205ENST00000502971 ZFC3H1O60293 1989 aaKnown RBP21.4■■□□□ 1.02
PTPN13-205ENST00000502971 SERTM1A2A2V5 107 aa21.39■■□□□ 1.01
PTPN13-205ENST00000502971 KRT87PA6NCN2 255 aa21.39■■□□□ 1.01
PTPN13-205ENST00000502971 CFLARO15519 480 aa21.39■■□□□ 1.01
PTPN13-205ENST00000502971 GNPDA1P46926 289 aa21.39■■□□□ 1.01
PTPN13-205ENST00000502971 NAE1Q13564 534 aa21.39■■□□□ 1.01
PTPN13-205ENST00000502971 CPSF6Q16630 551 aaKnown RBP eCLIP21.39■■□□□ 1.01
PTPN13-205ENST00000502971 IMPG1Q17R60 797 aa21.39■■□□□ 1.01
PTPN13-205ENST00000502971 PLA2G4EQ3MJ16 856 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms