RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 OSBPL9Q96SU4 736 aa13.54□□□□□ -0.24
VTI1A-206ENST00000489142 ADNPQ9H2P0 1102 aa13.54□□□□□ -0.24
VTI1A-206ENST00000489142 ACTR5Q9H9F9 607 aaPredicted RBP13.54□□□□□ -0.24
VTI1A-206ENST00000489142 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
VTI1A-206ENST00000489142 CRYL1Q9Y2S2 319 aa13.54□□□□□ -0.24
VTI1A-206ENST00000489142 PCDHGA6Q9Y5G7 932 aa13.54□□□□□ -0.24
VTI1A-206ENST00000489142 KCNMB2Q9Y691 235 aa13.54□□□□□ -0.24
VTI1A-206ENST00000489142 NFS1Q9Y697 457 aa13.54□□□□□ -0.24
VTI1A-206ENST00000489142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-206ENST00000489142 A0A0J9YY10 115 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 USP27XA6NNY8 438 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 C21orf140B9A014 251 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 K7EM74 188 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 AP3B1O00203 1094 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 MEN1O00255 615 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 MAP3K7O43318 606 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 ZNF749O43361 778 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 DNAJB5O75953 348 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 SLCO2B1O94956 709 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 SFTPCP11686 197 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 PTPN4P29074 926 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 ITGA1P56199 1179 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 CDK16Q00536 496 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 PLOD1Q02809 727 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-206ENST00000489142 CHAF1BQ13112 559 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 GRB7Q14451 532 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 CNSTQ6PJW8 725 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 DSELQ8IZU8 1212 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 ENDOVQ8N8Q3 282 aaKnown RBP13.53□□□□□ -0.24
VTI1A-206ENST00000489142 C9orf43Q8TAL5 461 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-206ENST00000489142 LPGAT1Q92604 370 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 N4BP2L2Q92802 583 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-206ENST00000489142 ZNF669Q96BR6 464 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-206ENST00000489142 ABHD17AQ96GS6 310 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 MENTQ9BUN1 341 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 SLC7A5P2Q9GIP4 190 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 SPRTNQ9H040 489 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-206ENST00000489142 LATS2Q9NRM7 1088 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 PCMTD2Q9NV79 361 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 OR6C2Q9NZP2 312 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 GALPQ9UBC7 116 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 SERTAD3Q9UJW9 196 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 POLHQ9Y253 713 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 MAN2B2Q9Y2E5 1009 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 NEU2Q9Y3R4 380 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 PCSK5Q92824 1860 aa13.53□□□□□ -0.24
VTI1A-206ENST00000489142 SPTA1P02549 2419 aa13.52□□□□□ -0.24
VTI1A-206ENST00000489142 E7EQ34 232 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 PHF2O75151 1096 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 KLK3P07288 261 aaPredicted RBP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 MAGP20916 626 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 RORAP35398 523 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 MAGEA6P43360 314 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 RAB28P51157 221 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 RPS15P62841 145 aaKnown RBP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 SARNPP82979 210 aaKnown RBP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 CYP1B1Q16678 543 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 KYNUQ16719 465 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 TYSND1Q2T9J0 566 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 CRTC2Q53ET0 693 aaPredicted RBP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 C1orf189Q5VU69 101 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 CPZQ66K79 652 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 KIAA0930Q6ICG6 404 aaPredicted RBP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 MRNIPQ6NTE8 343 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 FAM198BQ6UWH4 519 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 OTOAQ7RTW8 1153 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 DCUN1D3Q8IWE4 304 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 SYTL1Q8IYJ3 562 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 AGGF1Q8N302 714 aaeCLIP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 GSDMBQ8TAX9 411 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 SERPINB12Q96P63 405 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 PANX3Q96QZ0 392 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 TRIM55Q9BYV6 548 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 IRAK4Q9NWZ3 460 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 FARSAQ9Y285 508 aaKnown RBP13.52□□□□□ -0.25
VTI1A-206ENST00000489142 TP53TG5Q9Y2B4 290 aa13.52□□□□□ -0.25
VTI1A-206ENST00000489142 MED13Q9UHV7 2174 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 ZSCAN12O43309 604 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 SUV39H1O43463 412 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 KDM1AO60341 852 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 OR2B3O76000 313 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 RPN2P04844 631 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 PSMB5P28074 263 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 GABRA4P48169 554 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 FOXL2P58012 376 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 DHX34Q14147 1143 aaKnown RBP13.51□□□□□ -0.25
VTI1A-206ENST00000489142 KIR2DS3Q14952 304 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 UGT8Q16880 541 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 SLC5A12Q1EHB4 618 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 ZNF470Q6ECI4 717 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 UNC5DQ6UXZ4 953 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 ZNF517Q6ZMY9 492 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-206ENST00000489142 CENPUQ71F23 418 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-206ENST00000489142 DENND6AQ8IWF6 608 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 GPR135Q8IZ08 494 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms