RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 MPP5Q8N3R9 675 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 OTUD6BQ8N6M0 293 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 N4BP2L2Q92802 583 aaPredicted RBP22.21■■□□□ 1.15
COL9A3-213ENST00000489045 MFSD3Q96ES6 412 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 KIFC1Q9BW19 673 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 EPN3Q9H201 632 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 MRM3Q9HC36 420 aaKnown RBP22.21■■□□□ 1.15
COL9A3-213ENST00000489045 CIDEBQ9UHD4 219 aa22.21■■□□□ 1.15
COL9A3-213ENST00000489045 K7EM74 188 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 ZNF749O43361 778 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 HCRTR1O43613 425 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 NDUFS3O75489 264 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 DNAJB5O75953 348 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 SLCO2B1O94956 709 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 VAPBO95292 243 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 RPN2P04844 631 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 RAB40ALP0C0E4 278 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 ARNTP27540 789 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 GABRA4P48169 554 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 RAB28P51157 221 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 KIR2DS3Q14952 304 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 KYNUQ16719 465 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 SLC5A12Q1EHB4 618 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 TTC27Q6P3X3 843 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 FAM198BQ6UWH4 519 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 UNC5DQ6UXZ4 953 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 APLFQ8IW19 511 aaPredicted RBP22.2■■□□□ 1.14
COL9A3-213ENST00000489045 DCUN1D3Q8IWE4 304 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 GPR135Q8IZ08 494 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 LINC01555Q8NAE3 123 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 THAP4Q8WY91 577 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 PANX3Q96QZ0 392 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 MENTQ9BUN1 341 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 NLNQ9BYT8 704 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 TRIM55Q9BYV6 548 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 ANAPC2Q9UJX6 822 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 TLK1Q9UKI8 766 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 SOX13Q9UN79 622 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 SNX7Q9UNH6 387 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 MED13Q9UHV7 2174 aa22.2■■□□□ 1.14
COL9A3-213ENST00000489045 CCDC88CQ9P219 2028 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 CAPN1P07384 714 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 RPS3P23396 243 aaKnown RBP eCLIP22.19■■□□□ 1.144e-12■■□□□ 12.8
COL9A3-213ENST00000489045 EIF3BP55884 814 aaKnown RBP22.19■■□□□ 1.14
COL9A3-213ENST00000489045 GPS1Q13098 491 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 GRB7Q14451 532 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 KCNJ11Q14654 390 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 FAM69BQ5VUD6 431 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 CPZQ66K79 652 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 TCTN3Q6NUS6 607 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 LRRC6Q86X45 466 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 CHRNA10Q9GZZ6 450 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 TCFL5Q9UL49 500 aa22.19■■□□□ 1.14
COL9A3-213ENST00000489045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-213ENST00000489045 GOLGA8KD6RF30 607 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 H3BMH7 237 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 GOLGA8TH3BQL2 631 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 OR2B3O76000 313 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 KRT14P02533 472 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 HBQ1P09105 142 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 CASRP41180 1078 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 COLEC12Q5KU26 742 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 ZNF385CQ66K41 422 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-213ENST00000489045 FAM20CQ8IXL6 584 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 RASGEF1CQ8N431 466 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 LMNTD1Q8N9Z9 388 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 GSDMBQ8TAX9 411 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 MS4A14Q96JA4 679 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 IL17FQ96PD4 163 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 SPRTNQ9H040 489 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-213ENST00000489045 JRKLQ9Y4A0 524 aa22.18■■□□□ 1.14
COL9A3-213ENST00000489045 ARGFXA6NJG6 315 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 AVILO75366 819 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 CTSBP07858 339 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 MAGEA6P43360 314 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 CHAF1BQ13112 559 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 NCF4Q15080 339 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 CTSL3PQ5NE16 218 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 ANKRD22Q5VYY1 191 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 MRNIPQ6NTE8 343 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 OTOAQ7RTW8 1153 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 TAX1BP1Q86VP1 789 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 C2orf73Q8N5S3 287 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-213ENST00000489045 ADAMTS17Q8TE56 1095 aa22.17■■□□□ 1.14
COL9A3-213ENST00000489045 DPH2Q9BQC3 489 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-213ENST00000489045 TMEM63AO94886 807 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 MAGP20916 626 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 AGXTP21549 392 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 CD9P21926 228 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 PTGIRP43119 386 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 SARNPP82979 210 aaKnown RBP22.16■■□□□ 1.14
COL9A3-213ENST00000489045 TYSND1Q2T9J0 566 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 KIAA0930Q6ICG6 404 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-213ENST00000489045 ASB18Q6ZVZ8 466 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 SDCCAG8Q86SQ7 713 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-213ENST00000489045 DNAJC22Q8N4W6 341 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 OR2L8Q8NGY9 312 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 SKA2Q8WVK7 121 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-213ENST00000489045 LPGAT1Q92604 370 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 MAGOHBQ96A72 148 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms