RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 DAG1Q14118 895 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 SIM2Q14190 667 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 SLC14A2Q15849 920 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 DGUOKQ16854 277 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 GALNT5Q7Z7M9 940 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 RTN4RL1Q86UN2 441 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 MDGA1Q8NFP4 955 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 SLC22A17Q8WUG5 538 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 FATE1Q969F0 183 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 UBXN10Q96LJ8 280 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 FERD3LQ96RJ6 166 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 CAPN10Q9HC96 672 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 PDP1Q9P0J1 537 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 RAB23Q9ULC3 237 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 TMED5Q9Y3A6 229 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 GPSM3Q9Y4H4 160 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 OAS3Q9Y6K5 1087 aaKnown RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 PAPPA2Q9BXP8 1791 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 H0Y858 1186 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 BCKDKO14874 412 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 EFNA1P20827 205 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 HOXD9P28356 352 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 SERPINB1P30740 379 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 RFX3P48380 749 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 OGFRL1Q5TC84 451 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 CROCCP3Q8IVE0 287 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 DEPDC4Q8N2C3 294 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 GALNT15Q8N3T1 639 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 NRG4Q8WWG1 115 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 BIRC7Q96CA5 298 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 RGS5O15539 181 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PI15O43692 258 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 JUNP05412 331 aaKnown RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MYCLP1P12525 358 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 APLP1P51693 650 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SP140Q13342 867 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 COQ5Q5HYK3 327 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 BHLHB9Q6PI77 547 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SLC39A5Q6ZMH5 540 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 EIF3MQ7L2H7 374 aaKnown RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 ZCCHC7Q8N3Z6 543 aaKnown RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 B4GALNT2Q8NHY0 566 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CD200R1Q8TD46 325 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 TRIB3Q96RU7 358 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 TTLL2Q9BWV7 592 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 C1QTNF1Q9BXJ1 281 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 KLF16Q9BXK1 252 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 TRPS1Q9UHF7 1281 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 IGLV3-10A0A075B6K4 115 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 ERAL1O75616 437 aaKnown RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 WASP42768 502 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SSR2P43308 183 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MS4A2Q01362 244 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PTGR1Q14914 329 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 NADK2Q4G0N4 442 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CWF19L1Q69YN2 538 aaKnown RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 LIMS2Q7Z4I7 341 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PGBD5Q8N414 524 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF614Q8N883 585 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SLC45A3Q96JT2 553 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CLSTN3Q9BQT9 956 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CXorf21Q9HAI6 301 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 KRCC1Q9NPI7 259 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 ITM2CQ9NQX7 267 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MAFFQ9ULX9 164 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PDE9AO76083 593 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SEC24AO95486 1093 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 APODP05090 189 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 NR2F1P10589 423 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 ADH5P11766 374 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CPOXP36551 454 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 ZC3H12BQ5HYM0 836 aaKnown RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 TMC5Q6UXY8 1006 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MAVSQ7Z434 540 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 KIAA2013Q8IYS2 634 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SCAMP4Q969E2 229 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MYOCQ99972 504 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CCDC3Q9BQI4 270 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 EFCAB11Q9BUY7 163 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SDR39U1Q9NRG7 319 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CCM2LQ9NUG4 571 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PCDHGA7Q9Y5G6 932 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MUSKO15146 869 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 GJB3O75712 270 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PRKD3O94806 890 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MATN4O95460 622 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 BPIP17213 487 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 TEAD4Q15561 434 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 TYSND1Q2T9J0 566 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PLEKHS1Q5SXH7 462 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 OR4F3Q6IEY1 312 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 KLHL23Q8NBE8 558 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 FIBINQ8TAL6 211 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 NUS1Q96E22 293 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 PRICKLE1Q96MT3 831 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-214ENST00000487615 VPS35Q96QK1 796 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CCM2Q9BSQ5 444 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms