RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 LEKR1Q6ZMV7 388 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 RHOUQ7L0Q8 258 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 KIAA1328Q86T90 577 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 DTX2Q86UW9 622 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF354CQ86Y25 554 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 ARHGAP12Q8IWW6 846 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 UMODL1-AS1Q8N2C9 162 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 NPWQ8N729 165 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 PQLC3Q8N755 202 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF557Q8N988 423 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 LRRC57Q8N9N7 239 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 KCTD6Q8NC69 237 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 CCDC26Q8TAB7 109 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 UCMAQ8WVF2 138 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 FKBP10Q96AY3 582 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF503Q96F45 646 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 CELF6Q96J87 481 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 Q96MF0 132 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 BBC3Q96PG8 261 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 MLST8Q9BVC4 326 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 SORBS1Q9BX66 1292 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 SLC39A8Q9C0K1 460 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 LRRC19Q9H756 370 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 CATSPERBQ9H7T0 1116 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 PRSS16Q9NQE7 514 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 KCTD5Q9NXV2 234 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 LCMT1Q9UIC8 334 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 VPS51Q9UID3 782 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 VPS28Q9UK41 221 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 FBXO4Q9UKT5 387 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 SLC8A2Q9UPR5 921 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 DTNAQ9Y4J8 743 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 MIA3Q5JRA6 1907 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 PIPSLA2A3N6 862 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ZAR1LA6NP61 321 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 J3KR12 359 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 RNF103O00237 685 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 YY2O15391 372 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 KDELR3O43731 214 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 PALMO75781 387 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 IPO7O95373 1038 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 CHRM2P08172 466 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SRPRAP08240 638 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ITGA5P08648 1049 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 KRT7P08729 469 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SRCP12931 536 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 HOXB2P14652 356 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 GABRG2P18507 467 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 HTR7P34969 479 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 MARCKSL1P49006 195 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 PEX5P50542 639 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 PAPOLAP51003 745 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 NDST2P52849 883 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 NAP1L1P55209 391 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 YBEYP58557 167 aaPredicted RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SULT2A1Q06520 285 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SRSF1Q07955 248 aaKnown RBP eCLIP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SLC10A2Q12908 348 aaPredicted RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SRSF5Q13243 272 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ATP1A4Q13733 1029 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 PDK2Q15119 407 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 DLG2Q15700 870 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 LSM12Q3MHD2 195 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ZNF528Q3MIS6 628 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ANKRD20A8PQ5CZ79 823 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ABHD17BQ5VST6 288 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ABLIM2Q6H8Q1 611 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 MFSD7Q6UXD7 560 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 CLEC9AQ6UXN8 241 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SERPINA13PQ6UXR4 307 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 TRMT11Q7Z4G4 463 aaKnown RBP6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SPRED1Q7Z699 444 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 MRGPREQ86SM8 312 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 NT5DC3Q86UY8 548 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 RASGRP3Q8IV61 690 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 FRMD1Q8N878 549 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 C11orf44Q8N8P7 122 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 KDM1BQ8NB78 822 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ZBTB44Q8NCP5 570 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 CCDC112Q8NEF3 446 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 KIAA1524Q8TCG1 905 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ABHD5Q8WTS1 349 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 KRT35Q92764 455 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 VOPP1Q96AW1 172 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 FAF2Q96CS3 445 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 HMCESQ96FZ2 354 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 ZDHHC12Q96GR4 267 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 FBXL20Q96IG2 436 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 RNF157Q96PX1 679 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 AIFM2Q9BRQ8 373 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SERHL2Q9H4I8 314 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 EPS8L2Q9H6S3 715 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 GUCA1BQ9UMX6 200 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 DGKBQ9Y6T7 804 aa6.21□□□□□ -1.42
RTFDC1-209ENST00000487211 SETD2Q9BYW2 2564 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 DOCK4Q8N1I0 1966 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 NUP205Q92621 2012 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TCRBV21S2A2A0A5A6 115 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 CCDC189A1A4V9 331 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms