RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 MYZAPP0CAP1 466 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 SLC35E2BP0CK96 405 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 CBSLP0DN79 551 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 CBSP35520 551 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 RGS4P49798 205 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 TAF1BQ53T94 588 aaPredicted RBP11.31□□□□□ -0.6
HPS4-212ENST00000481910 PPM1JQ5JR12 505 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 TIFABQ6ZNK6 161 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 CCDC121Q6ZUS5 278 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 GRAMD2AQ8IUY3 354 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 SLC22A15Q8IZD6 547 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 NKAPQ8N5F7 415 aaKnown RBP11.31□□□□□ -0.6
HPS4-212ENST00000481910 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
HPS4-212ENST00000481910 SAP25Q8TEE9 199 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 MZB1Q8WU39 189 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 NR1H4Q96RI1 486 aaPredicted RBP11.31□□□□□ -0.6
HPS4-212ENST00000481910 WWP1Q9H0M0 922 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 VPS11Q9H270 941 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 OR52A5Q9H2C5 316 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 RAPGEFL1Q9UHV5 662 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 LGALS13Q9UHV8 139 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 PCDHGB3Q9Y5G1 929 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 OTOGLQ3ZCN5 2332 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 GOLGA8RI6L899 631 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 IFRD1O00458 451 aaPredicted RBP11.31□□□□□ -0.6
HPS4-212ENST00000481910 MAP2K7O14733 419 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 MGRN1O60291 552 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 RFPL1O75677 317 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 EML2O95834 649 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 RECKO95980 971 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 MPOP05164 745 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 F3P13726 295 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 ENO3P13929 434 aaPredicted RBP11.31□□□□□ -0.6
HPS4-212ENST00000481910 HALP42357 657 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 ABRQ12979 859 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 GBX1Q14549 363 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 UAP1L1Q3KQV9 507 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 LVRNQ6Q4G3 990 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 ABRAXAS1Q6UWZ7 409 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 WASH2PQ6VEQ5 465 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 TBC1D1Q86TI0 1168 aaPredicted RBP11.31□□□□□ -0.6
HPS4-212ENST00000481910 SPATA6LQ8N4H0 392 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 ISL2Q96A47 359 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 LINGO1Q96FE5 620 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 WASH6PQ9NQA3 447 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 PCOLCE2Q9UKZ9 415 aa11.31□□□□□ -0.6
HPS4-212ENST00000481910 TRBV23OR9-2A0A075B6M9 112 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 A0A087X1B8 175 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 AGPSO00116 658 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 PCDHGA12O60330 932 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 SKAP2O75563 359 aaPredicted RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 RASSF9O75901 435 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 DNAJC8O75937 253 aaPredicted RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 SASH3O75995 380 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 STAMBPO95630 424 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 BRAFP15056 766 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 ATP5DP30049 168 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 GMPRP36959 345 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 MAGEA12P43365 314 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 CSRP3P50461 194 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 MRPL28Q13084 256 aaKnown RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 CSHL1Q14406 222 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 CLCA4Q14CN2 919 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 AASDHQ4L235 1098 aaPredicted RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 LRRC8EQ6NSJ5 796 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 IYDQ6PHW0 289 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 PRR23CQ6ZRP0 262 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 PDZD3Q86UT5 571 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 NAGSQ8N159 534 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 CFAP61Q8NHU2 1237 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 ZDHHC1Q8WTX9 485 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 PGM2Q96G03 612 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 UBXN10Q96LJ8 280 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 C12orf66Q96MD2 445 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 EDEM2Q9BV94 578 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 UNKQ9C0B0 810 aaKnown RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 ABCG4Q9H172 646 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 RXFP3Q9NSD7 469 aa11.3□□□□□ -0.6
HPS4-212ENST00000481910 SCHIP1Q9P0W5 487 aaPredicted RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 CFAP20Q9Y6A4 193 aaKnown RBP11.3□□□□□ -0.6
HPS4-212ENST00000481910 OR52A4PA6NMU1 304 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 B4DGG1 531 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 CDX4O14627 284 aaPredicted RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 FOXD2O60548 495 aaPredicted RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 WISP3O95389 354 aaPredicted RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 TSPAN12O95859 305 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 ZNF883P0CG24 379 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 SLC2A4P14672 509 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 KRT4P19013 534 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 TGM1P22735 817 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 ACADLP28330 430 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 IRF9Q00978 393 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 CYHR1Q6ZMK1 362 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 ASCL5Q7RTU5 278 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 KANSL1Q7Z3B3 1105 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 PIWIL4Q7Z3Z4 852 aaKnown RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 TRABD2AQ86V40 505 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms