RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CCSMST1Q4G0I0 132 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 ATP6AP1LQ52LC2 224 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 UNC5DQ6UXZ4 953 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 CHST15Q7LFX5 561 aaPredicted RBP19.28■□□□□ 0.68
SSR1-204ENST00000474597 SPATA19Q7Z5L4 167 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 PDZD3Q86UT5 571 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 TRIM69Q86WT6 500 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 UTP4Q969X6 686 aaKnown RBP19.28■□□□□ 0.68
SSR1-204ENST00000474597 GUCD1Q96NT3 240 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 SLC29A3Q9BZD2 475 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 OR52A5Q9H2C5 316 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 TM7SF3Q9NS93 570 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 ASF1AQ9Y294 204 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 MRPS17Q9Y2R5 130 aaKnown RBP19.28■□□□□ 0.68
SSR1-204ENST00000474597 ST14Q9Y5Y6 855 aa19.28■□□□□ 0.68
SSR1-204ENST00000474597 IFRD1O00458 451 aaPredicted RBP19.27■□□□□ 0.68
SSR1-204ENST00000474597 RASSF9O75901 435 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 SLC16A8O95907 504 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 ALDOCP09972 364 aaKnown RBP19.27■□□□□ 0.68
SSR1-204ENST00000474597 PGM1P36871 562 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 HTR6P50406 440 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 IRX1P78414 480 aaPredicted RBP19.27■□□□□ 0.68
SSR1-204ENST00000474597 ZXDCQ2QGD7 858 aaPredicted RBP19.27■□□□□ 0.68
SSR1-204ENST00000474597 AGKQ53H12 422 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 CYB5D1Q6P9G0 228 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 THOC6Q86W42 341 aaKnown RBP19.27■□□□□ 0.68
SSR1-204ENST00000474597 DENND6BQ8NEG7 585 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 FBXO27Q8NI29 283 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 MAGEB10Q96LZ2 347 aaPredicted RBP19.27■□□□□ 0.68
SSR1-204ENST00000474597 LMAN1LQ9HAT1 526 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 ITM2CQ9NQX7 267 aa19.27■□□□□ 0.68
SSR1-204ENST00000474597 FPGTO14772 594 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 ULK1O75385 1050 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 KRT6AP02538 564 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 KRT6BP04259 564 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 ACADLP28330 430 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 IMPA1P29218 277 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 HALP42357 657 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 KRT6CP48668 564 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 GSTA3Q16772 222 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 METRNLQ641Q3 311 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 OGFOD2Q6N063 350 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 XKR5Q6UX68 686 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 GALNT13Q8IUC8 556 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 SYNPOQ8N3V7 929 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 DEFB123Q8N688 67 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 OR9A1PQ8NGU1 263 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 OR2T11Q8NH01 316 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 ZDHHC5Q9C0B5 715 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 CCDC167Q9P0B6 97 aa19.26■□□□□ 0.67
SSR1-204ENST00000474597 RGS14O43566 566 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 RPN2P04844 631 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 SLC35G4P0C7Q5 338 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 ACP5P13686 325 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 IDO1P14902 403 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 EPORP19235 508 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 HNRNPA2B1P22626 353 aaKnown RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 SLC25A3Q00325 362 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 UBXN2BQ14CS0 331 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 ABRAXAS2Q15018 415 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 NR6A1Q15406 480 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 CPSF6Q16630 551 aaKnown RBP eCLIP19.25■□□□□ 0.673e-9■■□□□ 12.8
SSR1-204ENST00000474597 IMPG1Q17R60 797 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 GGTA1PQ4G0N0 100 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 TMEM31Q5JXX7 168 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 FBXW10Q5XX13 1052 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 SYT13Q7L8C5 426 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 SYTL1Q8IYJ3 562 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 MIER2Q8N344 545 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 FNDC5Q8NAU1 212 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 MMADHCQ9H3L0 296 aaPredicted RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 OSGEPL1Q9H4B0 414 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 FBXL21Q9UKT6 434 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 ACSL5Q9ULC5 683 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 ZNF490Q9ULM2 529 aaPredicted RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 SNX6Q9UNH7 406 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 PSMD13Q9UNM6 376 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 SLC17A4Q9Y2C5 497 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 GPSM3Q9Y4H4 160 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 PRUNE2Q8WUY3 3088 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 SLC28A1O00337 649 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 AIM2O14862 343 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 SEMA4FO95754 770 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 CEACAM5P06731 702 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 PRR35P0CG20 571 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 ERVK-8P63133 956 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 HABP4Q5JVS0 413 aaKnown RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 GK5Q6ZS86 529 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 PPFIBP2Q8ND30 876 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 SPDYE1Q8NFV5 336 aaPredicted RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 OR56A3Q8NH54 315 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 TFGQ92734 400 aaPredicted RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 UHRF1Q96T88 793 aaPredicted RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 HBEGFQ99075 208 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 TIMM29Q9BSF4 260 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 THTPAQ9BU02 230 aa19.25■□□□□ 0.67
SSR1-204ENST00000474597 INTS7Q9NVH2 962 aaKnown RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 USP36Q9P275 1121 aaKnown RBP19.25■□□□□ 0.67
SSR1-204ENST00000474597 CHURC1-FNTBB4DL54 471 aa19.24■□□□□ 0.67
SSR1-204ENST00000474597 MANBAO00462 879 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms