RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CRYMQ14894 314 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 UAP1Q16222 522 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 ANKRD20A4Q4UJ75 823 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 KIAA0930Q6ICG6 404 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 KLHL35Q6PF15 583 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 ZNF517Q6ZMY9 492 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 HDXQ7Z353 690 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 TRAPPC5Q8IUR0 188 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 TTC30BQ8N4P2 665 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 SIDT2Q8NBJ9 832 aaKnown RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.83□□□□□ -1
SF3A1-206ENST00000471037 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 GPR150Q8NGU9 434 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 SSC4DQ8WTU2 575 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 ZNF514Q96K75 400 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 RUFY1Q96T51 708 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 CD180Q99467 661 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 SLC25A23Q9BV35 468 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 FUT8Q9BYC5 575 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 EPB41L4BQ9H329 900 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 VPS37BQ9H9H4 285 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 AKIRIN1Q9H9L7 192 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 CHRAC1Q9NRG0 131 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 TREX1Q9NSU2 369 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 CUEDC1Q9NWM3 386 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 WDR37Q9Y2I8 494 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 MAP4K5Q9Y4K4 846 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 PCDHGB7Q9Y5F8 929 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 ZCWPW2A0A1B0GU75 182 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 TCRBV9S1A1TA0A576 114 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 TLCD2A6NGC4 264 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 STX7O15400 261 aaKnown RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 CPNE3O75131 537 aaKnown RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 CEACAM4O75871 244 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 SLC4A1P02730 911 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 EBLN1P0CF75 366 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 NMBRP28336 390 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 HADHAP40939 763 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 EIF3BP55884 814 aaKnown RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 RPS18P62269 152 aaKnown RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 RPS15P62841 145 aaKnown RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 TMEM115Q12893 351 aaPredicted RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 IL10RAQ13651 578 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 GTF2H3Q13889 308 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 SLC29A2Q14542 456 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 LONRF1Q17RB8 773 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 KLHL38Q2WGJ6 581 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 NADK2Q4G0N4 442 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 ATP13A5Q4VNC0 1218 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 ZDHHC20Q5W0Z9 365 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 CPZQ66K79 652 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 FAM199XQ6PEV8 388 aaPredicted RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 CARFQ8N187 725 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 D2HGDHQ8N465 521 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 OR8K5Q8NH50 307 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 GABPB2Q8TAK5 448 aaPredicted RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 ADAMTS17Q8TE56 1095 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 FBF1Q8TES7 1133 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 CDKL2Q92772 493 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 MFSD3Q96ES6 412 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 CERS2Q96G23 380 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 ZNF778Q96MU6 729 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 MAP3K3Q99759 626 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 CCDC77Q9BR77 488 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 ZCCHC2Q9C0B9 1178 aaKnown RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 ACSS3Q9H6R3 686 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 VIPAS39Q9H9C1 493 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 PPCSQ9HAB8 311 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 PLAC1Q9HBJ0 212 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 LATS2Q9NRM7 1088 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 FGF21Q9NSA1 209 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 NLE1Q9NVX2 485 aaPredicted RBP8.82□□□□□ -1
SF3A1-206ENST00000471037 MOCS1Q9NZB8 636 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 IL17CQ9P0M4 197 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 FETUBQ9UGM5 382 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 PKP3Q9Y446 797 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 ARL5AQ9Y689 179 aa8.82□□□□□ -1
SF3A1-206ENST00000471037 ICE1Q9Y2F5 2266 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 OR5K3A6NET4 321 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 ARGFXA6NJG6 315 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 H7C0S8 307 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 AURKAO14965 403 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 ATP8B1O43520 1251 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 ARCN1P48444 511 aaKnown RBP8.81□□□□□ -1
SF3A1-206ENST00000471037 CTSCP53634 463 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 PRAMEP78395 509 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 HSD11B2P80365 405 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 MGAT5Q09328 741 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 NAB1Q13506 487 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 KCNAB1Q14722 419 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 CHRNA6Q15825 494 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 RPE65Q16518 533 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 HIST2H2BCQ6DN03 193 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 AFTPHQ6ULP2 937 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 CES3Q6UWW8 571 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 LRIG3Q6UXM1 1119 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 CERS6Q6ZMG9 384 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 CAPN12Q6ZSI9 719 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 CROCCP2Q86T23 111 aa8.81□□□□□ -1
SF3A1-206ENST00000471037 AMZ2Q86W34 360 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms