RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 DNTTIP2Q5QJE6 756 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 HP1BP3Q5SSJ5 553 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 FBXO38Q6PIJ6 1188 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 CENPUQ71F23 418 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 PTRH1Q86Y79 214 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 VRK3Q8IV63 474 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 APLFQ8IW19 511 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 TBC1D21Q8IYX1 336 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 GSDMBQ8TAX9 411 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 THAP4Q8WY91 577 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 RNF31Q96EP0 1072 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 PWWP2AQ96N64 755 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 EPN3Q9H201 632 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 TFB2MQ9H5Q4 396 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 SYTL2Q9HCH5 934 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 LNPEPQ9UIQ6 1025 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 PTPN13Q12923 2485 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 COL12A1Q99715 3063 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 EFCAB8A8MWE9 144 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 GPC4O75487 556 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 CREG1O75629 220 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 ZBTB11O95625 1053 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 S1PR4O95977 384 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 F7P08709 466 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 OGNP20774 298 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 CDH3P22223 829 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 ITGA8P53708 1063 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 TUBB4BP68371 445 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 FOXK1P85037 733 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 DNASE1L3Q13609 305 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 TUBB2AQ13885 445 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 MORF4L2Q15014 288 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 TMED2Q15363 201 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 TYSND1Q2T9J0 566 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 MSS51Q4VC12 460 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 DNAJC21Q5F1R6 531 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 ZNF789Q5FWF6 425 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 CTSL3PQ5NE16 218 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 TMTC4Q5T4D3 741 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 RNF187Q5TA31 235 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 ZNF470Q6ECI4 717 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 OTOAQ7RTW8 1153 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 AMIGO1Q86WK6 493 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 CILP2Q8IUL8 1156 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 DENND6AQ8IWF6 608 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 SLC22A15Q8IZD6 547 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 D2HGDHQ8N465 521 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 SPATA4Q8NEY3 305 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 SKA2Q8WVK7 121 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 LPGAT1Q92604 370 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 FAM136AQ96C01 138 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 ELMO2Q96JJ3 720 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 LRFN5Q96NI6 719 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 BIRC8Q96P09 236 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 TUBB2BQ9BVA1 445 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 FBXO6Q9NRD1 293 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 LATS2Q9NRM7 1088 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 POLG2Q9UHN1 485 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 CDYLQ9Y232 598 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 SNX24Q9Y343 169 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
CCHCR1-211ENST00000467553 SPENQ96T58 3664 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 BTN3A3O00478 584 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 BTN3A1O00481 513 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 KPNA5O15131 536 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 NIPSNAP2O75323 286 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 KATNA1O75449 491 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 RFPL1O75677 317 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 SLCO2B1O94956 709 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 ESR1P03372 595 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 MSL3P1P0C860 447 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 PKMP14618 531 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 PGAM1P18669 254 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 KPNA2P52292 529 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 PMS2P54278 862 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 RPS15P62841 145 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 C2orf54Q08AI8 447 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 ERV3-1Q14264 604 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 HSP90AA5PQ58FG0 334 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 UNC5AQ6ZN44 842 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 PDIK1LQ8N165 341 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 OR5K2Q8NHB8 316 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 CALML6Q8TD86 181 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 SNF8Q96H20 258 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 PPM1MQ96MI6 270 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 EBNA1BP2Q99848 306 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 TWSG1Q9GZX9 223 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 FANCEQ9HB96 536 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 ZNF71Q9NQZ8 489 aaPredicted RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 IARS2Q9NSE4 1012 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 INTS10Q9NVR2 710 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 TSR3Q9UJK0 312 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 PLAGL1Q9UM63 463 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 VPS9D1Q9Y2B5 631 aa13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 MRPS18BQ9Y676 258 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-211ENST00000467553 RELNP78509 3460 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 PIPSLA2A3N6 862 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 SLC9B1P1A6NJY1 282 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms