RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PLD2O14939 933 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RASSF9O75901 435 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FAM155BO75949 473 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TPBGLP0DKB5 382 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 POLR2CP19387 275 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CYP2A7P20853 494 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 MPSTP25325 297 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CNTFP26441 200 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CRABP2P29373 138 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 HSD17B2P37059 387 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 MLLT3P42568 568 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 MSH2P43246 934 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SERPINB9P50453 376 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RAB10P61026 200 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 KIR2DS3Q14952 304 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ARHGAP19Q14CB8 494 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RTP5Q14D33 572 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 UAP1Q16222 522 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ERCC6LQ2NKX8 1250 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 UBE2R2Q712K3 238 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RAB11FIP2Q7L804 512 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CCDC91Q7Z6B0 441 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 MARCH9Q86YJ5 346 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ADGRF3Q8IZF5 1079 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 LSMEM2Q8N112 164 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RCBTB1Q8NDN9 531 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 OR9A1PQ8NGU1 263 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 OR2L8Q8NGY9 312 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 HMGCLL1Q8TB92 370 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ANKRD7Q92527 254 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SLC22A18Q96BI1 424 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SLC12A9Q9BXP2 914 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TWSG1Q9GZX9 223 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ZNF768Q9H5H4 540 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 XKR8Q9H6D3 395 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CAB39LQ9H9S4 337 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 POLR1BQ9H9Y6 1135 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SEMA5BQ9P283 1151 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FETUBQ9UGM5 382 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 KLHL3Q9UH77 587 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PLAGL1Q9UM63 463 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 LOXL2Q9Y4K0 774 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 V9GYY5 206 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PTPRBP23467 1997 aa11.3□□□□□ -0.6
TRAF3IP1-204ENST00000462122 UNC13CQ8NB66 2214 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PABPN1LA6NDY0 278 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 KRT38O76015 456 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 WISP3O95389 354 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CHRM5P08912 532 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ENO2P09104 434 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 JMJD7P0C870 316 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ERGP11308 486 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 LSSP48449 732 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 KPNA2P52292 529 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 GABREP78334 506 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SLC29A2Q14542 456 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ZNF460Q14592 562 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 C16orf72Q14CZ0 275 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CCSMST1Q4G0I0 132 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 C3orf38Q5JPI3 329 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SNAP47Q5SQN1 464 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CACHD1Q5VU97 1274 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ANKS6Q68DC2 871 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TMEM207Q6UWW9 146 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FAM92BQ6ZTR7 304 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 KMT5CQ86Y97 462 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CEP97Q8IW35 865 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FBXO39Q8N4B4 442 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 UHMK1Q8TAS1 419 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 MCOLN3Q8TDD5 553 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 MRRFQ96E11 262 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CCDC77Q9BR77 488 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PARVBQ9HBI1 364 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 C1GALT1Q9NS00 363 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ACTR10Q9NZ32 417 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SATB2Q9UPW6 733 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FREM2Q5SZK8 3169 aa11.29□□□□□ -0.6
TRAF3IP1-204ENST00000462122 KNTC1P50748 2209 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TRABD2BA6NFA1 517 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 A8MU76 341 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 B4E171 279 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 POC1B-GALNT4F8VUJ3 575 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PHGDHO43175 533 aaKnown RBP11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 KRT37O76014 449 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FKBP9O95302 570 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 HIST1H2AGP0C0S8 130 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 HIST1H2ADP20671 130 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PRDX3P30048 256 aaKnown RBP11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SLC26A3P40879 764 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TSPAN7P41732 249 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SERPINB8P50452 374 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PGGT1BP53609 377 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 AP1S2P56377 157 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 ATP6V0D1P61421 351 aa11.28□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PPP1CAP62136 330 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms