RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MIA3Q5JRA6 1907 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 HELZ2Q9BYK8 2649 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 CACNA1IQ9P0X4 2223 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 NUP210Q8TEM1 1887 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TRAV19A0A0A6YYK7 116 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 HTR3EA5X5Y0 456 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 OR2W5A6NFC9 320 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SHISA7A6NL88 538 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MARCH11A6NNE9 402 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 AKR1B15C9JRZ8 316 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 ANHXE9PGG2 379 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 H0YC42 278 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF197O14709 1029 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 PCDH17O14917 1159 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MED7O43513 233 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CCNT2O60583 730 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MOCS2O96007 188 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 C1RP00736 705 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SERPING1P05155 500 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 HNRNPCP07910 306 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 ANXA6P08133 673 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MMP8P22894 467 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CDC25CP30307 473 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 GDI1P31150 447 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC5A2P31639 672 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CDH5P33151 784 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 RFC1P35251 1148 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 PRKCIP41743 596 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 RPL34P49207 117 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CLK3P49761 638 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TUBP50607 506 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SGSHP51688 502 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 PRKAA2P54646 552 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TPD52P55327 224 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 LOXL3P58215 753 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 C21orf58P58505 322 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MPP1Q00013 466 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 NHLH2Q02577 135 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 DMWDQ09019 674 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SCAPQ12770 1279 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 ATP1A4Q13733 1029 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CDO1Q16878 200 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 ASTE1Q2TB18 679 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 PTCHD3Q3KNS1 767 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 DCAF6Q58WW2 860 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 COLEC12Q5KU26 742 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 HECTD3Q5T447 861 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM102AQ5T9C2 384 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 AGAP9Q5VTM2 703 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 METRNLQ641Q3 311 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 PM20D1Q6GTS8 502 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 ACAD10Q6JQN1 1059 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 KLC3Q6P597 504 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 C6orf89Q6UWU4 347 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CCDC121Q6ZUS5 278 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MON1BQ7L1V2 547 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TAC4Q86UU9 113 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TMEM139Q8IV31 216 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 KIAA2013Q8IYS2 634 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 NRSN1Q8IZ57 195 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MCOLN2Q8IZK6 566 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SCAIQ8N9R8 606 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TMEM35BQ8NCS4 154 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 OR6Y1Q8NGX8 325 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 DQX1Q8TE96 717 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 RXFP2Q8WXD0 754 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 THAP4Q8WY91 577 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 RSC1A1Q92681 617 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CDKL2Q92772 493 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SMARCD2Q92925 531 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CENPTQ96BT3 561 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 GRAMD1AQ96CP6 724 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CFAP57Q96MR6 1250 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 NECTIN4Q96NY8 510 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 GCNAQ96QF7 691 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CCT7Q99832 543 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 SH3GL2Q99962 352 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 PTDSS2Q9BVG9 487 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 NUP58Q9BVL2 599 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CARD6Q9BX69 1037 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 LHX5Q9H2C1 402 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 GOLPH3Q9H4A6 298 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 EBF3Q9H4W6 596 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 NHEJ1Q9H9Q4 299 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 HPS4Q9NQG7 708 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TLR8Q9NR97 1041 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 HEBP1Q9NRV9 189 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 FKBP14Q9NWM8 211 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 GPATCH2LQ9NWQ4 482 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 PLK2Q9NYY3 685 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 ADAM22Q9P0K1 906 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 CTTNBP2NLQ9P2B4 639 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 EPS15L1Q9UBC2 864 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 TRIM10Q9UDY6 481 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 NENFQ9UMX5 172 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 R3HDM2Q9Y2K5 976 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 MRPS17Q9Y2R5 130 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 HYOU1Q9Y4L1 999 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 FADS3Q9Y5Q0 445 aa4.8□□□□□ -1.64
ATPAF1-203ENST00000460928 EPN1Q9Y6I3 576 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms